RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SLC39A2Q9NP94 309 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 HCFC1R1Q9NWW0 138 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 TSC2P49815 1807 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 H7C4K7 107 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 ABLIM3O94929 683 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 IL18RAPO95256 599 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 HNRNPA1P09651 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 COL9A1P20849 921 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 POU5F1Q01860 360 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 ARMCX5Q6P1M9 558 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 DSTYKQ6XUX3 929 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 GRASPQ7Z6J2 395 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 CBWD2Q8IUF1 395 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 FSIP1Q8NA03 581 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 APPL2Q8NEU8 664 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 ST13P5Q8NFI4 369 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 ZNF461Q8TAF7 563 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 SENP8Q96LD8 212 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 POLIQ9UNA4 740 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 PTPRJQ12913 1337 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 WDFY4Q6ZS81 3184 aa12.61□□□□□ -0.39
RABGGTA-216ENST00000560243 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 CLIC2O15247 247 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 OAZ2O95190 189 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 VNN2O95498 520 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 SYKP43405 635 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 CDR1P51861 262 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 YWHAHQ04917 246 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 LMBRD2Q68DH5 695 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 ZNF280DQ6N043 979 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 RNF19BQ6ZMZ0 732 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 HFE2Q6ZVN8 426 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 GET4Q7L5D6 327 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 RSAD2Q8WXG1 361 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 BORCS6Q96GS4 357 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 TMEM209Q96SK2 561 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 PYM1Q9BRP8 204 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 HSPBP1Q9NZL4 362 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 ZNF318Q5VUA4 2279 aa12.6□□□□□ -0.39
RABGGTA-216ENST00000560243 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 PRR33A8MZF0 331 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 PRRG1O14668 218 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 LDHAP00338 332 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 ITGB3P05106 788 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 ATF2P15336 505 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 POLR2BP30876 1174 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 HOXA9P31269 272 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 CYP2J2P51589 502 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 ADCY1Q08828 1119 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 STK4Q13043 487 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 BMT2Q1RMZ1 405 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 UVSSAQ2YD98 709 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 KMT5BQ4FZB7 885 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 OVOS1Q6IE37 1185 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 USP37Q86T82 979 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 C1orf127Q8N9H9 656 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 OR5B17Q8NGF7 314 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 ITFG1Q8TB96 612 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 PGLYRP2Q96PD5 576 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 CRISPLD1Q9H336 500 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 CYP4F11Q9HBI6 524 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 DNMT3BQ9UBC3 853 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
RABGGTA-216ENST00000560243 ARHGEF37A1IGU5 675 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 TMEM221A6NGB7 291 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 ZNF233A6NK53 670 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 M0R296 226 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 CYB561D2O14569 222 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 XYLBO75191 536 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 ODC1P11926 461 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 CPB1P15086 417 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 TYMPP19971 482 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 FSHRP23945 695 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms