RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 EDN1P05305 212 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 CDC42EP1Q00587 391 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 BFSP2Q13515 415 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 BRSK2Q8IWQ3 736 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 ACTRT1Q8TDG2 376 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 OSMRQ99650 979 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 ACO2Q99798 780 aaKnown RBP19.04■□□□□ 0.64
SNX1-208ENST00000559844 HTATIP2Q9BUP3 242 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 ADAMTS10Q9H324 1103 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 HIPK3Q9H422 1215 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 OSGEPQ9NPF4 335 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 PRDM5Q9NQX1 630 aaPredicted RBP19.04■□□□□ 0.64
SNX1-208ENST00000559844 TBX21Q9UL17 535 aa19.04■□□□□ 0.64
SNX1-208ENST00000559844 CNTNAP2Q9UHC6 1331 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 BUB1BO60566 1050 aaPredicted RBP19.03■□□□□ 0.64
SNX1-208ENST00000559844 SASH3O75995 380 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 CHRNA1P02708 482 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 KRT5P13647 590 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 FMO1Q01740 532 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 TAF3Q5VWG9 929 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 C8orf74Q6P047 294 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 ZNF410Q86VK4 478 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 ZNF677Q86XU0 584 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 ARHGEF26Q96DR7 871 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 HES6Q96HZ4 224 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 PCDHB18PQ96TA0 734 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 TCHPQ9BT92 498 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 PI4K2AQ9BTU6 479 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 CELF4Q9BZC1 486 aaKnown RBP19.03■□□□□ 0.64
SNX1-208ENST00000559844 PPP1R12CQ9BZL4 782 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 CDHR5Q9HBB8 845 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 IFT122Q9HBG6 1241 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 RBM12Q9NTZ6 932 aaKnown RBP19.03■□□□□ 0.64
SNX1-208ENST00000559844 SMARCAL1Q9NZC9 954 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 TRPV2Q9Y5S1 764 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 SCN5AQ14524 2016 aa19.03■□□□□ 0.64
SNX1-208ENST00000559844 PITPNM1O00562 1244 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 OGTO15294 1046 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 PLA2G4AP47712 749 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 TNNC1P63316 161 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 MCL1Q07820 350 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 LMBRD2Q68DH5 695 aaPredicted RBP19.02■□□□□ 0.64
SNX1-208ENST00000559844 WDR49Q8IV35 697 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 USP38Q8NB14 1042 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 LRRC1Q9BTT6 524 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 UMODL1Q5DID0 1318 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 MMEP08473 750 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 TBXAS1P24557 533 aaPredicted RBP19.02■□□□□ 0.64
SNX1-208ENST00000559844 PHKA2P46019 1235 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 WNT7BP56706 349 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 MGAT3Q09327 533 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 ZBTB41Q5SVQ8 909 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 C11orf63Q6NUN7 778 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 CCNI2Q6ZMN8 369 aaPredicted RBP19.02■□□□□ 0.64
SNX1-208ENST00000559844 NFKBIZQ9BYH8 718 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 FZD8Q9H461 694 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 GOLPH3Q9H4A6 298 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 CTTNBP2NLQ9P2B4 639 aa19.02■□□□□ 0.64
SNX1-208ENST00000559844 ACKR2O00590 384 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 CEP104O60308 925 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 PHACTR2O75167 634 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 MTA2O94776 668 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 VNN1O95497 513 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 HARSP12081 509 aaKnown RBP19.01■□□□□ 0.63
SNX1-208ENST00000559844 SELPP16109 830 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 CRYBB1P53674 252 aaPredicted RBP19.01■□□□□ 0.63
SNX1-208ENST00000559844 PTENP60484 403 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 POU5F1BQ06416 359 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 GPS2Q13227 327 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 TSHZ1Q6ZSZ6 1077 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 LRRC8DQ7L1W4 858 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 C7orf61Q8IZ16 206 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 TMEM40Q8WWA1 233 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 DDX1Q92499 740 aaKnown RBP19.01■□□□□ 0.63
SNX1-208ENST00000559844 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
SNX1-208ENST00000559844 ACBD3Q9H3P7 528 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 PCDHB2Q9Y5E7 798 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 PTPRJQ12913 1337 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 PGRMC1O00264 195 aaKnown RBP19.01■□□□□ 0.63
SNX1-208ENST00000559844 CSDE1O75534 798 aaKnown RBP19.01■□□□□ 0.63
SNX1-208ENST00000559844 FAM26DQ5JW98 314 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 SMYD5Q6GMV2 418 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 TRAF7Q6Q0C0 670 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 MPZL3Q6UWV2 235 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 ZBTB33Q86T24 672 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 RASGEF1CQ8N431 466 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.633e-7■■□□□ 11.8
SNX1-208ENST00000559844 IMPG2Q9BZV3 1241 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 STIM2Q9P246 746 aa19.01■□□□□ 0.63
SNX1-208ENST00000559844 TRIM43BA6NCK2 446 aa19■□□□□ 0.63
SNX1-208ENST00000559844 INO80B-WBP1J3KQ70 363 aa19■□□□□ 0.63
SNX1-208ENST00000559844 FAM189A1O60320 539 aa19■□□□□ 0.63
SNX1-208ENST00000559844 PROZP22891 400 aa19■□□□□ 0.63
SNX1-208ENST00000559844 TNFRSF8P28908 595 aa19■□□□□ 0.63
SNX1-208ENST00000559844 CYP2C18P33260 490 aa19■□□□□ 0.63
SNX1-208ENST00000559844 CUL2Q13617 745 aa19■□□□□ 0.63
SNX1-208ENST00000559844 CLUL1Q15846 466 aa19■□□□□ 0.63
SNX1-208ENST00000559844 ACAD10Q6JQN1 1059 aa19■□□□□ 0.63
SNX1-208ENST00000559844 TRIM43Q96BQ3 446 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms