RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 PALB2Q86YC2 1186 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 CSGALNACT2Q8N6G5 542 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 C12orf76Q8N812 135 aaPredicted RBP21.06■□□□□ 0.96
SHF-205ENST00000559566 PARD3BQ8TEW8 1205 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 SENP8Q96LD8 212 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 APOL5Q9BWW9 433 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHF-205ENST00000559566 GRXCR2A6NFK2 248 aa21.05■□□□□ 0.96
SHF-205ENST00000559566 TGM5O43548 720 aa21.05■□□□□ 0.96
SHF-205ENST00000559566 MRPS5P82675 430 aaKnown RBP21.05■□□□□ 0.96
SHF-205ENST00000559566 EDRF1Q3B7T1 1238 aa21.05■□□□□ 0.96
SHF-205ENST00000559566 LILRA6Q6PI73 481 aa21.05■□□□□ 0.96
SHF-205ENST00000559566 TRAPPC11Q7Z392 1133 aa21.05■□□□□ 0.96
SHF-205ENST00000559566 ZC3H3Q8IXZ2 948 aaKnown RBP21.05■□□□□ 0.96
SHF-205ENST00000559566 CACTINQ8WUQ7 758 aaKnown RBP21.05■□□□□ 0.96
SHF-205ENST00000559566 ADH1AP07327 375 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 BMP1P13497 986 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 TNNI1P19237 187 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 TAF6P49848 677 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 ADAM9Q13443 819 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 DUOXA2Q1HG44 320 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 KLHL10Q6JEL2 608 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 DSTYKQ6XUX3 929 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 CASP10Q92851 521 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 ANKRD36BP1Q96IX9 119 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 FNBP1Q96RU3 617 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 S1PR5Q9H228 398 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 CD207Q9UJ71 328 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 ITGA11Q9UKX5 1188 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 BACE2Q9Y5Z0 518 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 CDY1Q9Y6F8 540 aa21.04■□□□□ 0.96
SHF-205ENST00000559566 MBTPS2O43462 519 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 CST3P01034 146 aaPredicted RBP21.03■□□□□ 0.96
SHF-205ENST00000559566 KRT19P08727 400 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 IL9P15248 144 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 CCNE1P24864 410 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 OR1D2P34982 312 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 CLDN10P78369 228 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 ANKS3Q6ZW76 656 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 SMRP1Q8NCR6 262 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 DUSP9Q99956 384 aaKnown RBP21.03■□□□□ 0.96
SHF-205ENST00000559566 NUP62CLQ9H1M0 184 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 MAN1C1Q9NR34 630 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 FBXL5Q9UKA1 691 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 CTNND2Q9UQB3 1225 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 PLXNA3P51805 1871 aa21.03■□□□□ 0.96
SHF-205ENST00000559566 GLUD1P00367 558 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 TNNC2P02585 160 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 TRIM49P0CI25 452 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 TRIM49CP0CI26 452 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 RBP5P82980 135 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 BFSP1Q12934 665 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 TDRD10Q5VZ19 366 aaKnown RBP21.02■□□□□ 0.96
SHF-205ENST00000559566 PTCRAQ6ISU1 281 aaPredicted RBP21.02■□□□□ 0.96
SHF-205ENST00000559566 TTI2Q6NXR4 508 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 PPFIBP1Q86W92 1011 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 FAM186BQ8IYM0 893 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 LRRC52Q8N7C0 313 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 NELFBQ8WX92 580 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 ELMO3Q96BJ8 720 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 DHTKD1Q96HY7 919 aaPredicted RBP21.02■□□□□ 0.96
SHF-205ENST00000559566 MED15Q96RN5 788 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 TMEM209Q96SK2 561 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 RTP3Q9BQQ7 232 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 FRMD4BQ9Y2L6 1034 aa21.02■□□□□ 0.96
SHF-205ENST00000559566 BRWD1Q9NSI6 2320 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 SCN1AP35498 2009 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 FSD2A1L4K1 749 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 KPNA7A9QM74 516 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 CYB561D2O14569 222 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 MAPK13O15264 365 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 C4BPAP04003 597 aaKnown RBP21.01■□□□□ 0.95
SHF-205ENST00000559566 WEE2P0C1S8 567 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 OR4Q2P0C623 313 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 TYMPP19971 482 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 RPL13P26373 211 aaKnown RBP21.01■□□□□ 0.95
SHF-205ENST00000559566 STX17P56962 302 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 ROR1Q01973 937 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 CREMQ03060 361 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 RAB33AQ14088 237 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 CTXN3Q4LDR2 81 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 RARS2Q5T160 578 aaKnown RBP21.01■□□□□ 0.95
SHF-205ENST00000559566 WSCD1Q658N2 575 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 SLC8B1Q6J4K2 584 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 PDXDC1Q6P996 788 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 TRIML1Q8N9V2 468 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 APPL2Q8NEU8 664 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 TMC2Q8TDI7 906 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 ZNF560Q96MR9 790 aa21.01■□□□□ 0.95
SHF-205ENST00000559566 GTPBP4Q9BZE4 634 aaKnown RBP21.01■□□□□ 0.95
SHF-205ENST00000559566 WDR27A2RRH5 827 aa21■□□□□ 0.95
SHF-205ENST00000559566 PSMA7O14818 248 aa21■□□□□ 0.95
SHF-205ENST00000559566 RFPL2O75678 378 aa21■□□□□ 0.95
SHF-205ENST00000559566 OAZ2O95190 189 aa21■□□□□ 0.95
SHF-205ENST00000559566 VNN1O95497 513 aa21■□□□□ 0.95
SHF-205ENST00000559566 CYP11A1P05108 521 aa21■□□□□ 0.95
SHF-205ENST00000559566 ODC1P11926 461 aa21■□□□□ 0.95
SHF-205ENST00000559566 PSMC2P35998 433 aaKnown RBP21■□□□□ 0.95
SHF-205ENST00000559566 VAMP7P51809 220 aa21■□□□□ 0.95
SHF-205ENST00000559566 ARPP19P56211 112 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms