RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 YWHABP31946 246 aaKnown RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 BRCC3P46736 316 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 ALDH1A3P47895 512 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 AKAP17AQ02040 695 aaKnown RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 CYP4A11Q02928 519 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 HDAC1Q13547 482 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 RUNX3Q13761 415 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 CAPSQ13938 189 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 AMHR2Q16671 573 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 LYSMD4Q5XG99 296 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 ANO7Q6IWH7 933 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 RABEPKQ7Z6M1 372 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 CHD1LQ86WJ1 897 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 IFNLR1Q8IU57 520 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 CEP76Q8TAP6 659 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 DCBLD2Q96PD2 775 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 P2RY13Q9BPV8 354 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 C22orf23Q9BZE7 217 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 PRMT7Q9NVM4 692 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 POLR3BQ9NW08 1133 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 FBXL5Q9UKA1 691 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 YIPF1Q9Y548 306 aa10.66□□□□□ -0.7
SMAD3-211ENST00000559460 RBM8AQ9Y5S9 174 aaKnown RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 HELZ2Q9BYK8 2649 aaKnown RBP10.66□□□□□ -0.7
SMAD3-211ENST00000559460 ATXN2Q99700 1313 aaKnown RBP10.65□□□□□ -0.7
SMAD3-211ENST00000559460 WDFY3Q8IZQ1 3526 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 LRRIQ4A6NIV6 560 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 TNFRSF10BO14763 440 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 SYN3O14994 580 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 MARCH6O60337 910 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 C1QL1O75973 258 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
SMAD3-211ENST00000559460 BCKDHBP21953 392 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 FAM193AP78312 1265 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 Q4G0T1 1027 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 CC2D1AQ6P1N0 951 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-211ENST00000559460 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 ZBTB8OSQ8IWT0 167 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 SCUBE3Q8IX30 993 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 PNPLA1Q8N8W4 532 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
SMAD3-211ENST00000559460 LSM14AQ8ND56 463 aaKnown RBP10.65□□□□□ -0.7
SMAD3-211ENST00000559460 PIP4K2CQ8TBX8 421 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 KIF2CQ99661 725 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 NFKBIZQ9BYH8 718 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 CLMPQ9H6B4 373 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 GKN1Q9NS71 199 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 MBD1Q9UIS9 605 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-211ENST00000559460 SLC6A14Q9UN76 642 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 GDAQ9Y2T3 454 aa10.65□□□□□ -0.7
SMAD3-211ENST00000559460 VWA8A3KMH1 1905 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 A0A087WV48 116 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 HOXD12P35452 270 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-211ENST00000559460 BYSLQ13895 437 aaKnown RBP10.64□□□□□ -0.71
SMAD3-211ENST00000559460 UPP1Q16831 310 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 DUOXA1Q1HG43 343 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 LRRC69Q6ZNQ3 347 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-211ENST00000559460 C4orf19Q8IY42 314 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 TMEFF1Q8IYR6 380 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 MINDY1Q8N5J2 469 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 APPL2Q8NEU8 664 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 TBCKQ8TEA7 893 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 CRELD1Q96HD1 420 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 CNOT6LQ96LI5 555 aaKnown RBP10.64□□□□□ -0.71
SMAD3-211ENST00000559460 HNRNPABQ99729 332 aaKnown RBP10.64□□□□□ -0.71
SMAD3-211ENST00000559460 LXNQ9BS40 222 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 EBF3Q9H4W6 596 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 GOLGA2P5Q9HBQ8 144 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 BCCIPQ9P287 314 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMAD3-211ENST00000559460 DKK4Q9UBT3 224 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 EML5Q05BV3 1969 aa10.64□□□□□ -0.71
SMAD3-211ENST00000559460 NUP205Q92621 2012 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 PRAMEF12O95522 483 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 TDP2O95551 362 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 SYPP08247 313 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 GABRR2P28476 465 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 MARCKSP29966 332 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-211ENST00000559460 AVPR1AP37288 418 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 YARSP54577 528 aaKnown RBP10.63□□□□□ -0.71
SMAD3-211ENST00000559460 CYP4F3Q08477 520 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 FUT2Q10981 343 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 BFSP1Q12934 665 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 PRPF4BQ13523 1007 aaKnown RBP10.63□□□□□ -0.71
SMAD3-211ENST00000559460 NAB2Q15742 525 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 TAF12Q16514 161 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 TMC8Q8IU68 726 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 NOSTRINQ8IVI9 506 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 CPA6Q8N4T0 437 aa10.63□□□□□ -0.71
SMAD3-211ENST00000559460 CD101Q93033 1021 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms