RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 USP20Q9Y2K6 914 aa17.49■□□□□ 0.39
CDC42BPB-203ENST00000558867 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
CDC42BPB-203ENST00000558867 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 MYL4P12829 197 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 TDGF1P13385 188 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 PLD1Q13393 1074 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 CSRP2Q16527 193 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 ZNF568Q3ZCX4 644 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 PPM1JQ5JR12 505 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 CD300LGQ6UXG3 332 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 C3orf58Q8NDZ4 430 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 MRPL4Q9BYD3 311 aaKnown RBP17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 C8orf33Q9H7E9 229 aaPredicted RBP17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 TRPV4Q9HBA0 871 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 SEMA4GQ9NTN9 838 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 FBXL5Q9UKA1 691 aa17.48■□□□□ 0.39
CDC42BPB-203ENST00000558867 CCDC169A6NNP5 214 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 CPB1P15086 417 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 KCNE1P15382 129 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 KPNA1P52294 538 aaPredicted RBP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 OSTNP61366 133 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 VITQ6UXI7 678 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 LONP2Q86WA8 852 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 ZNF687Q8N1G0 1237 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 ZSCAN18Q8TBC5 510 aaPredicted RBP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 LEO1Q8WVC0 666 aaPredicted RBP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 KIFC3Q9BVG8 833 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 TMEM60Q9H2L4 133 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 RCOR1Q9UKL0 485 aa17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.47■□□□□ 0.39
CDC42BPB-203ENST00000558867 SHISA7A6NL88 538 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 MCF2P10911 925 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 CHRNB1P11230 501 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 CCNE1P24864 410 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 CCT6AP40227 531 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 TWF1Q12792 350 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 DMP1Q13316 513 aaPredicted RBP17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 MRPL58Q14197 206 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 DGKKQ5KSL6 1271 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 IL31Q6EBC2 164 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 ALKAL1Q6UXT8 129 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 PRR23CQ6ZRP0 262 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 CEP68Q76N32 757 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 HAUS6Q7Z4H7 955 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 SUSD3Q96L08 255 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 ACO2Q99798 780 aaKnown RBP17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 BHMT2Q9H2M3 363 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 TMEM134Q9H6X4 195 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.39
CDC42BPB-203ENST00000558867 HEPACAM2A8MVW5 462 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 CHADO15335 359 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 SEC24AO95486 1093 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 EDN1P05305 212 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 IGFBP6P24592 240 aaPredicted RBP17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 VIPR2P41587 438 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 CCR2P41597 374 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 ZNF445P59923 1031 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 SATB1Q01826 763 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 SOX4Q06945 474 aaPredicted RBP17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 PTGDRQ13258 359 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 RAB34Q9BZG1 259 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 CDT1Q9H211 546 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 GDPD2Q9HCC8 539 aa17.45■□□□□ 0.38
CDC42BPB-203ENST00000558867 TRIP11Q15643 1979 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 DPYSL4O14531 572 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 GADD45BO75293 160 aaPredicted RBP17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 PAPSS2O95340 614 aaPredicted RBP17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 YEATS4O95619 227 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 FGF19O95750 216 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 ALDH1A3P47895 512 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 FOSBP53539 338 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 EPHB3P54753 998 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 EPHA5P54756 1037 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 PEX3P56589 373 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 HS6ST3Q8IZP7 471 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 DDX12PQ92771 950 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 ZSWIM3Q96MP5 696 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 FOXP1Q9H334 677 aaPredicted RBP17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 KMT5AQ9NQR1 393 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 CEP72Q9P209 647 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 CNTN3Q9P232 1028 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 PCDHB8Q9UN66 801 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 CHD8Q9HCK8 2581 aa17.44■□□□□ 0.38
CDC42BPB-203ENST00000558867 CHURC1-FNTBB4DL54 471 aa17.43■□□□□ 0.38
CDC42BPB-203ENST00000558867 WNT7AO00755 349 aa17.43■□□□□ 0.38
CDC42BPB-203ENST00000558867 KCNA4P22459 653 aa17.43■□□□□ 0.38
CDC42BPB-203ENST00000558867 NASPP49321 788 aaPredicted RBP17.43■□□□□ 0.38
CDC42BPB-203ENST00000558867 FNTBP49356 437 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms