RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 NPTX2P47972 431 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 GUCY1B3Q02153 619 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 DMP1Q13316 513 aaPredicted RBP16.74■□□□□ 0.27
CPNE6-208ENST00000558795 LRRC32Q14392 662 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 TEAD2Q15562 447 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 PPM1JQ5JR12 505 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 C1orf228Q6PIY5 440 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.74■□□□□ 0.27
CPNE6-208ENST00000558795 DDX12PQ92771 950 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 C18orf25Q96B23 403 aaPredicted RBP16.74■□□□□ 0.27
CPNE6-208ENST00000558795 MSANTD3Q96H12 275 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 SUSD3Q96L08 255 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 TARS2Q9BW92 718 aaKnown RBP16.74■□□□□ 0.27
CPNE6-208ENST00000558795 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 TMEM134Q9H6X4 195 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 TRPV4Q9HBA0 871 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 PTPRHQ9HD43 1115 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 CNTN3Q9P232 1028 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 KIAA1024Q9UPX6 916 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 HEPACAM2A8MVW5 462 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 CHURC1-FNTBB4DL54 471 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 MOSPD3O75425 235 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 CHRNB1P11230 501 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 FNTBP49356 437 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
CPNE6-208ENST00000558795 EPHA5P54756 1037 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 MLLT6P55198 1093 aaPredicted RBP16.73■□□□□ 0.27
CPNE6-208ENST00000558795 ECM1Q16610 540 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 MPZL3Q6UWV2 235 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 SPEM1Q8N4L4 309 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 KMT5AQ9NQR1 393 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 SEMA4GQ9NTN9 838 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
CPNE6-208ENST00000558795 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
CPNE6-208ENST00000558795 KMT2BQ9UMN6 2715 aaPredicted RBP16.73■□□□□ 0.27
CPNE6-208ENST00000558795 CNR2P34972 360 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
CPNE6-208ENST00000558795 PTGDRQ13258 359 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 PLD1Q13393 1074 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 CSRP2Q16527 193 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 ST3GAL2Q16842 350 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 RNF19BQ6ZMZ0 732 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 PRR23CQ6ZRP0 262 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 CHAMP1Q96JM3 812 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 C8orf33Q9H7E9 229 aaPredicted RBP16.72■□□□□ 0.27
CPNE6-208ENST00000558795 ARHGAP28Q9P2N2 729 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 PCDHB8Q9UN66 801 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 YIPF1Q9Y548 306 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 STK24Q9Y6E0 443 aa16.72■□□□□ 0.27
CPNE6-208ENST00000558795 SLC38A8A6NNN8 435 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 HRO43593 1189 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 FOXD2O60548 495 aaPredicted RBP16.71■□□□□ 0.27
CPNE6-208ENST00000558795 HIP1RO75146 1068 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 KCNA4P22459 653 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 PROZP22891 400 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 YWHAHQ04917 246 aaPredicted RBP16.71■□□□□ 0.27
CPNE6-208ENST00000558795 GNL2Q13823 731 aaKnown RBP16.71■□□□□ 0.27
CPNE6-208ENST00000558795 GAS6Q14393 721 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 HEATR6Q6AI08 1181 aaKnown RBP16.71■□□□□ 0.27
CPNE6-208ENST00000558795 LONP2Q86WA8 852 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 SHKBP1Q8TBC3 707 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 RAB34Q9BZG1 259 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
CPNE6-208ENST00000558795 NCANO14594 1321 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 A0A1W2PRU2 124 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 ARNTLO00327 626 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 CHADO15335 359 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 EPHB3P54753 998 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 DMWDQ09019 674 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 STRN3Q13033 797 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 SRSF5Q13243 272 aaKnown RBP16.7■□□□□ 0.26
CPNE6-208ENST00000558795 CEP68Q76N32 757 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 PGLYRP2Q96PD5 576 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 OXCT2Q9BYC2 517 aaPredicted RBP16.7■□□□□ 0.26
CPNE6-208ENST00000558795 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
CPNE6-208ENST00000558795 RBM12Q9NTZ6 932 aaKnown RBP16.7■□□□□ 0.26
CPNE6-208ENST00000558795 TUBGCP4Q9UGJ1 667 aa16.7■□□□□ 0.26
CPNE6-208ENST00000558795 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
CPNE6-208ENST00000558795 E9PMD0 336 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 DPYSL4O14531 572 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 ABLIM1O14639 778 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 SLC16A4O15374 487 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 PAPSS2O95340 614 aaPredicted RBP16.69■□□□□ 0.26
CPNE6-208ENST00000558795 SYT1P21579 422 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 ALDH1A3P47895 512 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 SOX9P48436 509 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 NOLC1Q14978 699 aaKnown RBP eCLIP16.69■□□□□ 0.26
CPNE6-208ENST00000558795 DGKKQ5KSL6 1271 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 Q6ZS52 159 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 USP37Q86T82 979 aa16.69■□□□□ 0.26
CPNE6-208ENST00000558795 DAW1Q8N136 415 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms