RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
RPL28-206ENST00000558752 MYCT1Q8N699 235 aa16.63■□□□□ 0.25
RPL28-206ENST00000558752 ZBTB44Q8NCP5 570 aa16.63■□□□□ 0.25
RPL28-206ENST00000558752 TARS2Q9BW92 718 aaKnown RBP16.63■□□□□ 0.25
RPL28-206ENST00000558752 BRD9Q9H8M2 597 aa16.63■□□□□ 0.25
RPL28-206ENST00000558752 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
RPL28-206ENST00000558752 CFAP45Q9UL16 551 aa16.63■□□□□ 0.25
RPL28-206ENST00000558752 OTOGLQ3ZCN5 2332 aa16.63■□□□□ 0.25
RPL28-206ENST00000558752 VWA8A3KMH1 1905 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 PODXLO00592 558 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 TRAK2O60296 914 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 BRCC3P46736 316 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 LMNB2Q03252 620 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 DHX8Q14562 1220 aaKnown RBP16.62■□□□□ 0.25
RPL28-206ENST00000558752 XKR4Q5GH76 650 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 MPZL3Q6UWV2 235 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 HAUS6Q7Z4H7 955 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 APPL2Q8NEU8 664 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 E2F7Q96AV8 911 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 ZNF512Q96ME7 567 aaPredicted RBP16.62■□□□□ 0.25
RPL28-206ENST00000558752 CNTNAP3BQ96NU0 1288 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 CORO1BQ9BR76 489 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 TRMT61BQ9BVS5 477 aaKnown RBP16.62■□□□□ 0.25
RPL28-206ENST00000558752 CNTNAP3Q9BZ76 1288 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 SEL1LQ9UBV2 794 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 GMEB2Q9UKD1 530 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 RAB23Q9ULC3 237 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 USP20Q9Y2K6 914 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 MTF2Q9Y483 593 aaPredicted RBP16.62■□□□□ 0.25
RPL28-206ENST00000558752 FRYLO94915 3013 aa16.62■□□□□ 0.25
RPL28-206ENST00000558752 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 I3L4J1 428 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 CLDN3O15551 220 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 TBCAO75347 108 aaKnown RBP16.61■□□□□ 0.25
RPL28-206ENST00000558752 EDN1P05305 212 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 KCNE1P15382 129 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 CD72P21854 359 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 TARSP26639 723 aaKnown RBP16.61■□□□□ 0.25
RPL28-206ENST00000558752 ARPP19P56211 112 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 RSPO4Q2I0M5 234 aaPredicted RBP16.61■□□□□ 0.25
RPL28-206ENST00000558752 CTXN3Q4LDR2 81 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 ALKAL1Q6UXT8 129 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 DEPDC1BQ8WUY9 529 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 OXCT2Q9BYC2 517 aaPredicted RBP16.61■□□□□ 0.25
RPL28-206ENST00000558752 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 CDT1Q9H211 546 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 EPC1Q9H2F5 836 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 ST6GALNAC4Q9H4F1 302 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 GOLGA2P5Q9HBQ8 144 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 HEBP1Q9NRV9 189 aa16.61■□□□□ 0.25
RPL28-206ENST00000558752 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
RPL28-206ENST00000558752 WDR27A2RRH5 827 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 CUTAO60888 179 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 LILRB5O75023 590 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 F13A1P00488 732 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 CEBPBP17676 345 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 PSMC3P17980 439 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 OSTNP61366 133 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 MCL1Q07820 350 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 SLC5A9Q2M3M2 681 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 TANGO2Q6ICL3 276 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 CD300LGQ6UXG3 332 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 MAMSTRQ6ZN01 415 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 C3orf58Q8NDZ4 430 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 CUEDC2Q9H467 287 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 PLEKHA5Q9HAU0 1116 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 TRPV5Q9NQA5 729 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 TBX20Q9UMR3 447 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 SMG5Q9UPR3 1016 aaKnown RBP16.6■□□□□ 0.25
RPL28-206ENST00000558752 INSL5Q9Y5Q6 135 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 EPG5Q9HCE0 2579 aa16.6■□□□□ 0.25
RPL28-206ENST00000558752 PIGRP01833 764 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 GAP43P17677 238 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 MCM4P33991 863 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 STAT6P42226 847 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 GTF2BQ00403 316 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 AMPD3Q01432 767 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 PLD1Q13393 1074 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 PRSS36Q5K4E3 855 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 DDX12PQ92771 950 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 NELL1Q92832 810 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 SMARCD2Q92925 531 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 MSANTD3Q96H12 275 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 PLA2G2FQ9BZM2 168 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 ZHX3Q9H4I2 956 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 PRMT8Q9NR22 394 aaPredicted RBP16.59■□□□□ 0.25
RPL28-206ENST00000558752 ASAH2Q9NR71 780 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 CNTN3Q9P232 1028 aa16.59■□□□□ 0.25
RPL28-206ENST00000558752 AFF4Q9UHB7 1163 aaKnown RBP16.59■□□□□ 0.25
RPL28-206ENST00000558752 FBXL5Q9UKA1 691 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms