RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 LIG4P49917 911 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 ATXN1P54253 815 aaKnown RBP12.54□□□□□ -0.4
CASC4-205ENST00000558735 GTF2BQ00403 316 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
CASC4-205ENST00000558735 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 TPGS2Q68CL5 300 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 APPL2Q8NEU8 664 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 CLDN23Q96B33 292 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 BICD1Q96G01 975 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 BCO2Q9BYV7 579 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 PLA2G2FQ9BZM2 168 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 EPC1Q9H2F5 836 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 TIMM13Q9Y5L4 95 aaPredicted RBP12.54□□□□□ -0.4
CASC4-205ENST00000558735 SPTBN2O15020 2390 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 CHD8Q9HCK8 2581 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 VPS37CA5D8V6 355 aaPredicted RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 M0QZQ0 153 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 LAMTOR5O43504 91 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 OAZ2O95190 189 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 LRG1P02750 347 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 SYT1P21579 422 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 SCP2P22307 547 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 TGM1P22735 817 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC4-205ENST00000558735 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 LMNB2Q03252 620 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 ADCY1Q08828 1119 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 KYAT1Q16773 422 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 ZC2HC1CQ53FD0 456 aaPredicted RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 SLC44A4Q53GD3 710 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 MTSS1LQ765P7 747 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 LARP4BQ92615 738 aaKnown RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 TCEAL4Q96EI5 215 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 KXD1Q9BQD3 176 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 RPF1Q9H9Y2 349 aaKnown RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 ZSCAN32Q9NX65 697 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 GDE1Q9NZC3 331 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 NCDNQ9UBB6 729 aa12.53□□□□□ -0.4
CASC4-205ENST00000558735 AFF4Q9UHB7 1163 aaKnown RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
CASC4-205ENST00000558735 CITO14578 2027 aa12.52□□□□□ -0.4
CASC4-205ENST00000558735 K7ENM7 598 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 PPEF2O14830 753 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 HNRNPDLO14979 420 aaKnown RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 LRRN2O75325 713 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 VNN2O95498 520 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 CEBPBP17676 345 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 CCR2P41597 374 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 RPS9P46781 194 aaKnown RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 PFKPQ01813 784 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 RESTQ13127 1097 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 MLF2Q15773 248 aaPredicted RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 PRSS36Q5K4E3 855 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 ZNF720Q7Z2F6 126 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 HS6ST3Q8IZP7 471 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 BEST2Q8NFU1 509 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 ATRIPQ8WXE1 791 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 CLIC6Q96NY7 704 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 TSPAN18Q96SJ8 248 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 NELL2Q99435 816 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 RTKNQ9BST9 563 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 MSTO1Q9BUK6 570 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 FAM126AQ9BYI3 521 aaPredicted RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 SPATA6Q9NWH7 488 aaPredicted RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 CEP72Q9P209 647 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 FBXO2Q9UK22 296 aaPredicted RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 SRPRBQ9Y5M8 271 aaKnown RBP12.52□□□□□ -0.41
CASC4-205ENST00000558735 INSL5Q9Y5Q6 135 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 MYH11P35749 1972 aa12.52□□□□□ -0.41
CASC4-205ENST00000558735 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 TISP43B9A030 160 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 MOSPD3O75425 235 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 ECI2O75521 394 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 MICAL2O94851 1124 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 PDCP20941 246 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 ACOT2P49753 483 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 LILRA4P59901 499 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 YWHAHQ04917 246 aaPredicted RBP12.51□□□□□ -0.41
CASC4-205ENST00000558735 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 JADE1Q6IE81 842 aa12.51□□□□□ -0.41
CASC4-205ENST00000558735 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms