RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SFI1A8K8P3 1242 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 H7C4K7 107 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 K7ENM7 598 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 HNRNPDLO14979 420 aaKnown RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 CCL16O15467 120 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 CLDN3O15551 220 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 ADAM12O43184 909 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 TBCAO75347 108 aaKnown RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 FAM13AO94988 1023 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 KRT18P05783 430 aaKnown RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 PDCP20941 246 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 MCM4P33991 863 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 OR1D2P34982 312 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 LONP1P36776 959 aaKnown RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 UBA7P41226 1012 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 BRCC3P46736 316 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 LIG4P49917 911 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 EMP3P54852 163 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 SLC12A3P55017 1021 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 PPP2R3AQ06190 1150 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 MCL1Q07820 350 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 KYAT1Q16773 422 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 CRTC2Q53ET0 693 aaPredicted RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 SLC8B1Q6J4K2 584 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 ZNF280DQ6N043 979 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 ALKAL1Q6UXT8 129 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 MTSS1LQ765P7 747 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 GRASPQ7Z6J2 395 aaPredicted RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 CCDC105Q8IYK2 499 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 KCNN1Q92952 543 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 PLIN2Q99541 437 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 REEP2Q9BRK0 252 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 NTPCRQ9BSD7 190 aaKnown RBP8.79□□□□□ -1
TRAF3-205ENST00000558700 FAM86C1Q9NVL1 165 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 WNT16Q9UBV4 365 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 CDH7Q9ULB5 785 aa8.79□□□□□ -1
TRAF3-205ENST00000558700 VPS37CA5D8V6 355 aaPredicted RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 ANHXE9PGG2 379 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 H0Y858 1186 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 I3L4J1 428 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 PRRG1O14668 218 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 XPOTO43592 962 aaKnown RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 NARSO43776 548 aaKnown RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 GFRA3O60609 400 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 LRG1P02750 347 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 CLTAP09496 248 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 CXCL8P10145 99 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 PLCG1P19174 1290 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 RPL9P32969 192 aaKnown RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 ATP1A2P50993 1020 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 ROR1Q01973 937 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 PABPC1LQ4VXU2 614 aaKnown RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 HAUS6Q7Z4H7 955 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 SLC44A3Q8N4M1 653 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 APPL2Q8NEU8 664 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 RSAD2Q8WXG1 361 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 LARP4BQ92615 738 aaKnown RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 SUSD3Q96L08 255 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 ZMAT2Q96NC0 199 aaKnown RBP8.78□□□□□ -1
TRAF3-205ENST00000558700 TBC1D17Q9HA65 648 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 PLEKHA5Q9HAU0 1116 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 PARVGQ9HBI0 331 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 ARHGEF3Q9NR81 526 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 SLC2A4RGQ9NR83 387 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 KCNH3Q9ULD8 1083 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 CA14Q9ULX7 337 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 NUMBLQ9Y6R0 609 aa8.78□□□□□ -1
TRAF3-205ENST00000558700 DOCK6Q96HP0 2047 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 NPHP3-ACAD11A0A0J9YXS1 232 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 OGTO15294 1046 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 PIGRP01833 764 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 CPB1P15086 417 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 NPR3P17342 541 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 ELF1P32519 619 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 TXLNAP40222 546 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 NBL1P41271 181 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 ZNF131P52739 623 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 NTHL1P78549 312 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 CUL4AQ13619 759 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 DHX8Q14562 1220 aaKnown RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 KARSQ15046 597 aaKnown RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 CTXN3Q4LDR2 81 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 TPGS2Q68CL5 300 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 CD300LGQ6UXG3 332 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 RSPO2Q6UXX9 243 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 MAP4K3Q8IVH8 894 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 NPAS3Q8IXF0 933 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 ELMOD1Q8N336 334 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 MYCT1Q8N699 235 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 ZNF461Q8TAF7 563 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 GPR152Q8TDT2 470 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 RAD54LQ92698 747 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 FGF13Q92913 245 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 C18orf25Q96B23 403 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 ZBTB45Q96K62 511 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 TSPAN18Q96SJ8 248 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 BLOC1S4Q9NUP1 217 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms