RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TDP2O95551 362 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 GCAP28676 217 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 MYBPC2Q14324 1141 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 CCDC142Q17RM4 750 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 RIPOR1Q6ZS17 1223 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 C3orf62Q6ZUJ4 267 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 TMEM126BQ8IUX1 230 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 MARVELD2Q8N4S9 558 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 SLC35B4Q969S0 331 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 OXNAD1Q96HP4 312 aaPredicted RBP17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 ZNHIT2Q9UHR6 403 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 TELO2Q9Y4R8 837 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 CCDC162PA2VCL2 907 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 SPECC1L-ADORA2AF8WAN1 911 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 CASQ2O14958 399 aaPredicted RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 DENRO43583 198 aaKnown RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 PORP16435 677 aaPredicted RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 TSHRP16473 764 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 VCLP18206 1134 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 EIF4BP23588 611 aaKnown RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 PDE1BQ01064 536 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 CHRNDQ07001 517 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 CETN1Q12798 172 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 IZUMO3Q5VZ72 239 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 MOXD1Q6UVY6 613 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 NCCRP1Q6ZVX7 275 aaPredicted RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 ZNF564Q8TBZ8 553 aaPredicted RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 FNDC8Q8TC99 324 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 TRPC4APQ8TEL6 797 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 C17orf50Q8WW18 174 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 GAB3Q8WWW8 586 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 HAS1Q92839 578 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 S100A14Q9HCY8 104 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 SEPT11Q9NVA2 429 aaKnown RBP17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 TAGLN3Q9UI15 199 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 PLA2G4CQ9UP65 541 aa17.08■□□□□ 0.33
HMBOX1-212ENST00000558662 TCRBV7S2A1N4TA0A589 114 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 VILLO15195 856 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ZNF862O60290 1169 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 OATP04181 439 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 CDK4P11802 303 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 AMPD1P23109 780 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 GTF2H1P32780 548 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 TNIP1Q15025 636 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 PDK3Q15120 406 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 PKN2Q16513 984 aaKnown RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 PDCD4Q53EL6 469 aaKnown RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 EFHC2Q5JST6 749 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 SYDE2Q5VT97 1194 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 PCNX4Q63HM2 1172 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 GJB7Q6PEY0 223 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 STXBP4Q6ZWJ1 553 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ULK2Q8IYT8 1036 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ALLCQ8N6M5 410 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ITPKCQ96DU7 683 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 MTBPQ96DY7 904 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 TMEM120AQ9BXJ8 343 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 EBF3Q9H4W6 596 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 TAS2R14Q9NYV8 317 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 CAPN14A8MX76 684 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 B2RBV5 119 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 E9PBE3 544 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 TOM1O60784 492 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 CLPTM1O96005 669 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 DLATP10515 647 aaKnown RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ETS2P15036 469 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 PHBP35232 272 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 HOXD13P35453 343 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 GJA8P48165 433 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 CREB5Q02930 508 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ARSHQ5FYA8 562 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 OLFML2BQ68BL8 750 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 UGT2A3Q6UWM9 527 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 BBS5Q8N3I7 341 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 ZNF276Q8N554 614 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 RFWD2Q8NHY2 731 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 VPS50Q96JG6 964 aa17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 TUBA8Q9NY65 449 aaPredicted RBP17.07■□□□□ 0.32
HMBOX1-212ENST00000558662 MYH11P35749 1972 aa17.06■□□□□ 0.32
HMBOX1-212ENST00000558662 A0A0G2JND7 137 aa17.06■□□□□ 0.32
HMBOX1-212ENST00000558662 TMEM110-MUSTN1A8MSY1 372 aa17.06■□□□□ 0.32
HMBOX1-212ENST00000558662 E9PMD0 336 aa17.06■□□□□ 0.32
HMBOX1-212ENST00000558662 FCHO1O14526 889 aa17.06■□□□□ 0.32
HMBOX1-212ENST00000558662 SPATA31D3P0C874 917 aa17.06■□□□□ 0.32
HMBOX1-212ENST00000558662 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms