RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 RFPL3O75679 317 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 FARP2O94887 1054 aaPredicted RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 CKMP06732 381 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SLC3A2P08195 630 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 HOXC6P09630 235 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SNHG28P0DPA3 235 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 PYGMP11217 842 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 GNAT1P11488 350 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 RGS2P41220 211 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SLC6A11P48066 632 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 DNM2P50570 870 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 CDR1P51861 262 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 EPHB3P54753 998 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 PRMT2P55345 433 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 DLG4P78352 724 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 RBM10P98175 930 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 EXOSC10Q01780 885 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 ZNF543Q08ER8 600 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 IKQ13123 557 aaPredicted RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 BAATQ14032 418 aaPredicted RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 ZNF460Q14592 562 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SLC9A5Q14940 896 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 ARHGEF6Q15052 776 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 IMMTQ16891 758 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 PLEKHG4Q58EX7 1191 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SYDE2Q5VT97 1194 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 MAMDC4Q6UXC1 1216 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 BTNL9Q6UXG8 535 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 OTOP3Q7RTS5 596 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 OSTM1Q86WC4 334 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 KRTAP1-3Q8IUG1 177 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 CCAR1Q8IX12 1150 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 ADGRF4Q8IZF3 695 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SEC14L1Q92503 715 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 FBXW5Q969U6 566 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 FERMT2Q96AC1 680 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TSPAN17Q96FV3 270 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 FAM84AQ96KN4 292 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TTC14Q96N46 770 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TAAR1Q96RJ0 339 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 KATNBL1Q9H079 304 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 AP5M1Q9H0R1 490 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 SLC6A20Q9NP91 592 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 A1CFQ9NQ94 594 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 CATSPERZQ9NTU4 200 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 COL20A1Q9P218 1284 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 MAD2L2Q9UI95 211 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 CBLCQ9ULV8 474 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 COQ6Q9Y2Z9 468 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TELO2Q9Y4R8 837 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TNPO3Q9Y5L0 923 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 MYH7BA7E2Y1 1941 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 ZMYM6O95789 1325 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 CEP290O15078 2479 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 CCDC66A2RUB6 948 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 H0YGN5 161 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 WNT9AO14904 365 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 CTAGE5O15320 804 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 PRC1O43663 620 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 STRNO43815 780 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 PLEKHA8P1O95397 391 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 PGK1P00558 417 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 HMGCRP04035 888 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 KRT1P04264 644 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 FCER1AP12319 257 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 CYBAP13498 195 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 ZKSCAN1P17029 563 aaPredicted RBP4.92□□□□□ -1.62
SPG11-211ENST00000558561 SYN1P17600 705 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 NAT1P18440 290 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 HSD3B2P26439 372 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 PMLP29590 882 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 STAT2P52630 851 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 GYS2P54840 703 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 UBXN2AP68543 259 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 CCNA1P78396 465 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 BEX3Q00994 111 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 SPIRE1Q08AE8 756 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 TROAPQ12815 778 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 QRICH1Q2TAL8 776 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 USH1GQ495M9 461 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 BMP2KLQ5H9B9 411 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 HABP4Q5JVS0 413 aaKnown RBP4.92□□□□□ -1.62
SPG11-211ENST00000558561 OLFML2BQ68BL8 750 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 TAPT1Q6NXT6 567 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 SLC30A10Q6XR72 485 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 C16orf59Q7L2K0 433 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 DGKHQ86XP1 1220 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 TICAM2Q86XR7 235 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 SRBD1Q8N5C6 995 aaKnown RBP4.92□□□□□ -1.62
SPG11-211ENST00000558561 POU5F2Q8N7G0 328 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 FAM133AQ8N9E0 248 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 ARRDC4Q8NCT1 418 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 SHCBP1Q8NEM2 672 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 MZB1Q8WU39 189 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 CHURC1Q8WUH1 139 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 ALG3Q92685 438 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 ESR2Q92731 530 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 DDX11Q96FC9 970 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 PIGSQ96S52 555 aa4.92□□□□□ -1.62
SPG11-211ENST00000558561 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms