RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 AGAP1Q9UPQ3 857 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 CPDO75976 1380 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 TTC23LQ6PF05 361 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 SNX31Q8N9S9 440 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 SESN1Q9Y6P5 492 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 UGGT1Q9NYU2 1555 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 CORO7P57737 925 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 BYSLQ13895 437 aaKnown RBP14.62□□□□□ -0.07
SPG11-210ENST00000558319 MRPL4Q9BYD3 311 aaKnown RBP14.62□□□□□ -0.07
SPG11-210ENST00000558319 TPST1O60507 370 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 CALB1P05937 261 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 VHLP40337 213 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 BCAR1P56945 870 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 ZCWPW2Q504Y3 356 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 CYB5D1Q6P9G0 228 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 CASP10Q92851 521 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 PLEKHA5Q9HAU0 1116 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 HERC5Q9UII4 1024 aaKnown RBP14.62□□□□□ -0.07
SPG11-210ENST00000558319 AGO2Q9UKV8 859 aaKnown RBP14.62□□□□□ -0.07
SPG11-210ENST00000558319 SNX12Q9UMY4 172 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 SOX13Q9UN79 622 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 YWHABP31946 246 aaKnown RBP14.62□□□□□ -0.07
SPG11-210ENST00000558319 TWF1Q12792 350 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 FUT11Q495W5 492 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 SIX5Q8N196 739 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 KAT2BQ92831 832 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 NSMCE4AQ9NXX6 385 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 ABCC2Q92887 1545 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 KIAA0556O60303 1618 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 FAM205CA6NFA0 338 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 AP3B1O00203 1094 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 HMOX2P30519 316 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 IRAK1P51617 712 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 CYP4A22Q5TCH4 519 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 RHOT1Q8IXI2 618 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 CNDP1Q96KN2 507 aa14.62□□□□□ -0.07
SPG11-210ENST00000558319 NFKBIL1Q9UBC1 381 aaPredicted RBP14.62□□□□□ -0.07
SPG11-210ENST00000558319 INSRP06213 1382 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 TMEM120BA0PK00 339 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 KIF28PB7ZC32 967 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 RNF103O00237 685 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 TPI1P60174 286 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 NECTIN1Q15223 517 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 MFN1Q8IWA4 741 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 SIRT2Q8IXJ6 389 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 GLMNQ92990 594 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 OPTNQ96CV9 577 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 OSBPL10Q9BXB5 764 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 OSBPL3Q9H4L5 887 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 TRIM45Q9H8W5 580 aaPredicted RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 GEMIN8Q9NWZ8 242 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 ZFATQ9P243 1243 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 FOXP4Q8IVH2 680 aaPredicted RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 KLK7P49862 253 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 KNOP1Q1ED39 458 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 WDR72Q3MJ13 1102 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 RCSD1Q6JBY9 416 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 TRIM69Q86WT6 500 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 KDM4CQ9H3R0 1056 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 RBM12Q9NTZ6 932 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 SCN3BQ9NY72 215 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 PZPP20742 1482 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 MAGEA13PA6NCF6 341 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 APOL1O14791 398 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 E4F1Q66K89 784 aaPredicted RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 XPO7Q9UIA9 1087 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 STRNO43815 780 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 TCF3P15923 654 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 QARSP47897 775 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 KCNJ6P48051 423 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 OVGP1Q12889 678 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 ARL6IP4Q66PJ3 421 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 CCNI2Q6ZMN8 369 aaPredicted RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 MAGEB5Q9BZ81 275 aa14.61□□□□□ -0.07
SPG11-210ENST00000558319 CELF4Q9BZC1 486 aaKnown RBP14.61□□□□□ -0.07
SPG11-210ENST00000558319 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 NCF1BA6NI72 391 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 NCF1CA8MVU1 366 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 PDHBP11177 359 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 NCF1P14598 390 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 ATP1A4Q13733 1029 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 PFKFB3Q16875 520 aaPredicted RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 CACUL1Q86Y37 369 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 MCEEQ96PE7 176 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 UTP6Q9NYH9 597 aaKnown RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 BLOC1S6Q9UL45 172 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 TFR2Q9UP52 801 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 FAM32AQ9Y421 112 aaKnown RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 F8W8V4 182 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 APRTP07741 180 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 GPR141Q7Z602 305 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 KCNK16Q96T55 309 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 MRPS26Q9BYN8 205 aaKnown RBP14.6□□□□□ -0.07
SPG11-210ENST00000558319 LY9Q9HBG7 655 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 HAO1Q9UJM8 370 aa14.6□□□□□ -0.07
SPG11-210ENST00000558319 CDYLQ9Y232 598 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms