RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CHRNDQ07001 517 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 CD69Q07108 199 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 CACNB2Q08289 660 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 PSMD6Q15008 389 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 TAF11Q15544 211 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ARHGAP15Q53QZ3 475 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ZKSCAN2Q63HK3 967 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 HAUS3Q68CZ6 603 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 RNF43Q68DV7 783 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 TEPPQ6URK8 271 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ABHD15Q6UXT9 468 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 Q6ZVL8 140 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ENOSF1Q7L5Y1 443 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 UNC5BQ8IZJ1 945 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 MPP5Q8N3R9 675 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 BCL7CQ8WUZ0 217 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 ST8SIA4Q92187 359 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 ZUFSPQ96AP4 578 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SDCCAG3Q96C92 435 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 NELL2Q99435 816 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SOX7Q9BT81 388 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 IRX2Q9BZI1 471 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 CHST8Q9H2A9 424 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 MLXIPQ9HAP2 919 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 RXFP1Q9HBX9 757 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SLAMF7Q9NQ25 335 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 KCND1Q9NSA2 647 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 TMEM160Q9NX00 188 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SAE1Q9UBE0 346 aaPredicted RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 EBF1Q9UH73 591 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 DNAI1Q9UI46 699 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 TMEM59LQ9UK28 342 aa4.31□□□□□ -1.72
TDP1-217ENST00000557782 SCAF8Q9UPN6 1271 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 MTO1Q9Y2Z2 717 aaKnown RBP4.31□□□□□ -1.72
TDP1-217ENST00000557782 ZC3H12DA2A288 527 aaKnown RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 PI4KAP2A4QPH2 592 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 FITM1A5D6W6 292 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 PABPN1LA6NDY0 278 aaKnown RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 MYO1CO00159 1063 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 TOR1BO14657 336 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CYP26A1O43174 497 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 TEX33O43247 280 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 AHCYL1O43865 530 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 TMEM63AO94886 807 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 MATN4O95460 622 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 GLP2RO95838 553 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 TK1P04183 234 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 AMY1AP04745 511 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 GNAI2P04899 355 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 RARBP10826 455 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 IL1R1P14778 569 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 EGR1P18146 543 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 RXRAP19793 462 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CRHR1P34998 444 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 WNT3AP56704 352 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ZBED6P86452 979 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CTBP1Q13363 440 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 IKZF1Q13422 519 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ADAM9Q13443 819 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CUL4BQ13620 913 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 KIR3DS1Q14943 382 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 UBE3CQ15386 1083 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 STILQ15468 1287 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CDC37Q16543 378 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 MAPKAPK3Q16644 382 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 VWA3BQ502W6 1294 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 UBXN11Q5T124 520 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ATPAF1Q5TC12 328 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 MAP3K21Q5TCX8 1036 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 KANK2Q63ZY3 851 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ZNF385CQ66K41 422 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 GRAMD4Q6IC98 578 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ACAD10Q6JQN1 1059 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 PAQR3Q6TCH7 311 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 DPP8Q6V1X1 898 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 RINLQ6ZS11 566 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 KRT28Q7Z3Y7 464 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CREBRFQ8IUR6 639 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ZGPATQ8N5A5 531 aaKnown RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 PDZD8Q8NEN9 1154 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CASKIN2Q8WXE0 1202 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 SPSB4Q96A44 273 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 WDR92Q96MX6 357 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ALPK1Q96QP1 1244 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 UIMC1Q96RL1 719 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
TDP1-217ENST00000557782 RTKNQ9BST9 563 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 DDX23Q9BUQ8 820 aaKnown RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 AGXT2Q9BYV1 514 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 GPR63Q9BZJ6 419 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 PAIP1Q9H074 479 aaKnown RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 SEMA6BQ9H3T3 888 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 TAF1DQ9H5J8 278 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 LDAHQ9H6V9 325 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 CARS2Q9HA77 564 aaKnown RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 NOD2Q9HC29 1040 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 HAUS2Q9NVX0 235 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms