RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RPS9P46781 194 aaKnown RBP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 ATXN1P54253 815 aaKnown RBP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 SATB1Q01826 763 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 SRSF5Q13243 272 aaKnown RBP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 GAS6Q14393 721 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 NOLC1Q14978 699 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 WDR44Q5JSH3 913 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 CYP4A22Q5TCH4 519 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 RTL10Q7L3V2 364 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 TTC9BQ8N6N2 239 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 SHKBP1Q8TBC3 707 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 FAM3CQ92520 227 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 ZNF512Q96ME7 567 aaPredicted RBP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 CNTNAP3BQ96NU0 1288 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 PNMA5Q96PV4 448 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 TMEM209Q96SK2 561 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 CNTNAP3Q9BZ76 1288 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 CHRDQ9H2X0 955 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 AFF4Q9UHB7 1163 aaKnown RBP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 A0A1W2PRU2 124 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 HEPACAM2A8MVW5 462 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 PSMC3P17980 439 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 TGM1P22735 817 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 SPEM2Q0P670 501 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 PRR23BQ6ZRT6 265 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 MAP4K3Q8IVH8 894 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 ELMOD1Q8N336 334 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 SMARCD2Q92925 531 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 NELL2Q99435 816 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 DNAJC25Q9H1X3 360 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 ASAH2Q9NR71 780 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 PCDHB8Q9UN66 801 aa15.37■□□□□ 0.05
SLIRP-210ENST00000557431 MRPS17Q9Y2R5 130 aaKnown RBP15.37■□□□□ 0.05
SLIRP-210ENST00000557431 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.37■□□□□ 0.05
SLIRP-210ENST00000557431 SLC38A8A6NNN8 435 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 ZNF197O14709 1029 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 RPL9P32969 192 aaKnown RBP15.36■□□□□ 0.05
SLIRP-210ENST00000557431 TRAPPC10P48553 1259 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 DUSP4Q13115 394 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 PDIA5Q14554 519 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 TPGS2Q68CL5 300 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 Q6ZS52 159 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 TMC8Q8IU68 726 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 TMEM161BQ8NDZ6 487 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 IRF7Q92985 503 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 ZFYVE19Q96K21 471 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
SLIRP-210ENST00000557431 LRRC3Q9BY71 257 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 PPP4R2Q9NY27 417 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 SLC27A5Q9Y2P5 690 aa15.36■□□□□ 0.05
SLIRP-210ENST00000557431 CHURC1-FNTBB4DL54 471 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 ZNF263O14978 683 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 MAPTP10636 758 aaKnown RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.051e-7■□□□□ 8
SLIRP-210ENST00000557431 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 FNTBP49356 437 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 EPHA5P54756 1037 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 STRN3Q13033 797 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 HEATR6Q6AI08 1181 aaKnown RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 APPL2Q8NEU8 664 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 LRRC15Q8TF66 581 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
SLIRP-210ENST00000557431 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 RBM19Q9Y4C8 960 aaKnown RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 HELZP42694 1942 aaKnown RBP15.35■□□□□ 0.05
SLIRP-210ENST00000557431 NUP205Q92621 2012 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 LACTBL1A8MY62 500 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 ARNTLO00327 626 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 MAN2B1O00754 1011 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 TOM1L1O75674 476 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 KRT37O76014 449 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 CHRNB1P11230 501 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 PLS3P13797 630 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 HMGN5P82970 282 aaKnown RBP15.34■□□□□ 0.05
SLIRP-210ENST00000557431 TXNDC11Q6PKC3 985 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 DSTYKQ6XUX3 929 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 DTHD1Q6ZMT9 781 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 MFSD6LQ8IWD5 586 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 ATAD1Q8NBU5 361 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 BICD1Q96G01 975 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 LRRC3BQ96PB8 259 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 MKNK1Q9BUB5 465 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 GMEB2Q9UKD1 530 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 CDV3Q9UKY7 258 aaKnown RBP15.34■□□□□ 0.05
SLIRP-210ENST00000557431 MYOFQ9NZM1 2061 aa15.34■□□□□ 0.05
SLIRP-210ENST00000557431 MAP1BP46821 2468 aaKnown RBP15.34■□□□□ 0.05
SLIRP-210ENST00000557431 TTC26A0AVF1 554 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 MTMR11A4FU01 709 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 VWA3AA6NCI4 1184 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 M0QZQ0 153 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 CLDN3O15551 220 aa15.33■□□□□ 0.04
SLIRP-210ENST00000557431 MICAL2O94851 1124 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms