RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 CYTH3O43739 400 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ETS2P15036 469 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 CSE1LP55060 971 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 HPCAP84074 193 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 DSG1Q02413 1049 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 MAP3K10Q02779 954 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 TMEM62Q0P6H9 643 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 HNRNPDQ14103 355 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 TNIP1Q15025 636 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 SLC4A8Q2Y0W8 1093 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 TMEM259Q4ZIN3 620 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 VPS52Q8N1B4 723 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 UBL4BQ8N7F7 174 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 USP6NLQ92738 828 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ECSITQ9BQ95 431 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ZSWIM1Q9BR11 485 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 DNAJB4Q9UDY4 337 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 MAD2L2Q9UI95 211 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 COG5Q9UP83 839 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ALG6Q9Y672 507 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 A0A0J9YVX5 310 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 TMEM238LA0A1B0GVL6 79 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ITIH2P19823 946 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 TXKP42681 527 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 KCNQ4P56696 695 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 SNX16P57768 344 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ITGA9Q13797 1035 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 GRM2Q14416 872 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 SPARCL1Q14515 664 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 KBTBD12Q3ZCT8 623 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 NLRP10Q86W26 655 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 CCDC105Q8IYK2 499 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 DTX3LQ8TDB6 740 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 ANKRD49Q8WVL7 239 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 KRT35Q92764 455 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 STMN2Q93045 179 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 PPP2R3CQ969Q6 453 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 NUDT12Q9BQG2 462 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 OSBPL10Q9BXB5 764 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 LRRC19Q9H756 370 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 NINJ2Q9NZG7 142 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 PTTG2Q9NZH5 202 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 WDR37Q9Y2I8 494 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 SPO11Q9Y5K1 396 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
SUPT16H-207ENST00000557394 A0A1B0GUL6 1792 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 A0A1W2PRQ8 180 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 USP17L12C9JPN9 530 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 USP17L21D6R901 530 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 F8W8V4 182 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RECKO95980 971 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 APBA3O96018 575 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 COL6A1P12109 1028 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 STAT1P42224 750 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 BCAMP50895 628 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RAP1GDS1P52306 607 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 NR1H3Q13133 447 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 STAT4Q14765 748 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 KYNUQ16719 465 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 KLC3Q6P597 504 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 MTDHQ86UE4 582 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 WDR75Q8IWA0 830 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RHOT2Q8IXI1 618 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 ZBTB8BQ8NAP8 495 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 IPCEF1Q8WWN9 437 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 ARL8BQ9NVJ2 186 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RHBDL2Q9NX52 303 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 KANSL3Q9P2N6 904 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 GRID1Q9ULK0 1009 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 SCN7AQ01118 1682 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 UBR3Q6ZT12 1888 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 GTPBP10A4D1E9 387 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RASA4BC9J798 803 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 SNAP23O00161 211 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 IRS4O14654 1257 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RASA4O43374 803 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 PDE8AO60658 829 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RNASEH1O60930 286 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 RPS6KA4O75676 772 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 CHRNB2P17787 502 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 IVDP26440 423 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 SOX5P35711 763 aa11.07□□□□□ -0.64
SUPT16H-207ENST00000557394 GRIA2P42262 883 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms