RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SMCO2A6NFE2 343 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 SMTNL1A8MU46 457 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 BECN2A8MW95 431 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 GOLGA6L6A8MZA4 724 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 B2RBV5 119 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 LAD1O00515 517 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 MPHOSPH10O00566 681 aaKnown RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 MEFVO15553 781 aaPredicted RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 MYO1BO43795 1136 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 SMC2O95347 1197 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ADCY5O95622 1261 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 PTMAP06454 111 aaKnown RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 GOLGA8HP0CJ92 632 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 SNHG28P0DPA3 235 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 COL6A1P12109 1028 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 AKR1B1P15121 316 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 SHMT1P34896 483 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 MRPL12P52815 198 aaKnown RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 TPM4P67936 248 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 GRIN1Q05586 938 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ORC2Q13416 577 aaPredicted RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 ZNF174Q15697 407 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ABCB5Q2M3G0 1257 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ANO6Q4KMQ2 910 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 CT47A1Q5JQC4 288 aaPredicted RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 TTC38Q5R3I4 469 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 SLFN13Q68D06 897 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 DENND5AQ6IQ26 1287 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 KRBA2Q6ZNG9 492 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 PIK3AP1Q6ZUJ8 805 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 TMEM179Q6ZVK1 233 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 HEATR3Q7Z4Q2 680 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 CEP57L1Q8IYX8 460 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 KREMEN2Q8NCW0 462 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 CNNM3Q8NE01 707 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 FAM151AQ8WW52 585 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 PIBF1Q8WXW3 757 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ANAPC16Q96DE5 110 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 PRMT6Q96LA8 375 aaPredicted RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 GMLQ99445 158 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 BPIFA3Q9BQP9 254 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 MTFR1LQ9H019 292 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ZMYND12Q9H0C1 365 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 TDRD3Q9H7E2 651 aaKnown RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 VAT1LQ9HCJ6 419 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 NGRNQ9NPE2 291 aaKnown RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 CLDND1Q9NY35 253 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 HERC5Q9UII4 1024 aaKnown RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 FBXO2Q9UK22 296 aaPredicted RBP5.02□□□□□ -1.61
SRP54-212ENST00000556992 PCDHB6Q9Y5E3 794 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 COL4A1P02462 1669 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 LY75O60449 1722 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 DDX60Q8IY21 1712 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 ESYT2A0FGR8 921 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 DDTLA6NHG4 134 aaPredicted RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 YDJCA8MPS7 323 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PSMD14O00487 310 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 FOXS1O43638 330 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 CYTH3O43739 400 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 TADA3O75528 432 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 RAD17O75943 681 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 CNOT4O95628 575 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 ITGAVP06756 1048 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PDHBP11177 359 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 RPS12P25398 132 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 LONP1P36776 959 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 KCNJ6P48051 423 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 NAPAP54920 295 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 ZNF543Q08ER8 600 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 TCP10Q12799 353 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 DHX8Q14562 1220 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 NONOQ15233 471 aaKnown RBP eCLIP5.01□□□□□ -1.61
SRP54-212ENST00000556992 NPY5RQ15761 445 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 LONRF3Q496Y0 759 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 FAM83AQ86UY5 434 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 ZSCAN30Q86W11 494 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PPIL6Q8IXY8 311 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 KLHL36Q8N4N3 616 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 IQUBQ8NA54 791 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 MLKLQ8NB16 471 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 RASGRP4Q8TDF6 673 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 DCAF4Q8WV16 495 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 LRRC37BQ96QE4 947 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PIGSQ96S52 555 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 NAP1L4Q99733 375 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 UBA5Q9GZZ9 404 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 CSRNP2Q9H175 543 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 BARX1Q9HBU1 254 aaPredicted RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 ZNF277Q9NRM2 450 aaPredicted RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 MYOTQ9UBF9 498 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PPARGC1AQ9UBK2 798 aaKnown RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 ZNF70Q9UC06 446 aaPredicted RBP5.01□□□□□ -1.61
SRP54-212ENST00000556992 TUBE1Q9UJT0 475 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PCDHA6Q9UN73 950 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PTPN22Q9Y2R2 807 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PCDHA8Q9Y5H6 950 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 PLIN4Q96Q06 1357 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 BCORQ6W2J9 1755 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 CASZ1Q86V15 1759 aa5.01□□□□□ -1.61
SRP54-212ENST00000556992 COL24A1Q17RW2 1714 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms