RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SREBF2Q12772 1141 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 VGLL4Q14135 290 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 STILQ15468 1287 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 RNF151Q2KHN1 245 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 WDR72Q3MJ13 1102 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 HS1BP3Q53T59 392 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ZMAT1Q5H9K5 638 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ZC3H12BQ5HYM0 836 aaKnown RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ERO1BQ86YB8 467 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 FOXP4Q8IVH2 680 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ZC3H7AQ8IWR0 971 aaKnown RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 LCORLQ8N3X6 602 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 KBTBD3Q8NAB2 608 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 SCYL1Q96KG9 808 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 DRC1Q96MC2 740 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ZDHHC5Q9C0B5 715 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 SCAND2PQ9GZW5 306 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 DHX36Q9H2U1 1008 aaKnown RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 RNF186Q9NXI6 227 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 GALNT8Q9NY28 637 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 PI4KBQ9UBF8 816 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ZHX2Q9Y6X8 837 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 FLT1P17948 1338 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CYP2D7A0A087X1C5 515 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CCL15-CCL14A0A0B4J2E2 113 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 MANSC4A6NHS7 340 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 TRIM75PA6NK02 468 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 KCNK3O14649 394 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 MPIG6BO95866 241 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 ZFYP08048 801 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CYP2D6P10635 497 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 MC4RP32245 332 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 ACVRL1P37023 503 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 GDF5P43026 501 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 TDO2P48775 406 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 DNM2P50570 870 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 INHBEP58166 350 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CCL15Q16663 113 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CERS3Q8IU89 383 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 FUKQ8N0W3 1084 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 JMYQ8N9B5 988 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 GSTCDQ8NEC7 633 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 SORCS2Q96PQ0 1159 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 SEC62Q99442 399 aaKnown RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 CABP5Q9NP86 173 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-243ENST00000556671 FBXO10Q9UK96 956 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 OAZ3Q9UMX2 235 aa5.53□□□□□ -1.52
ATXN3-243ENST00000556671 SSC5DA1L4H1 1573 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 FAM221BA6H8Z2 402 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 M0R2C6 588 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 CYR61O00622 381 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 EFCAB14O75071 495 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 AMHP03971 560 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 CETPP11597 493 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 CR2P20023 1033 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 GTF2F1P35269 517 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 TM4SF4P48230 202 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 PLCD1P51178 756 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 RRADP55042 308 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 PPATQ06203 517 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 RBL2Q08999 1139 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 SPP2Q13103 211 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 NFYCQ13952 458 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 PRKD1Q15139 912 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 SEC23AQ15436 765 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 TRIM61Q5EBN2 209 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 NOSTRINQ8IVI9 506 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 SCYL3Q8IZE3 742 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 APPBP2Q92624 585 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 EDAQ92838 391 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 DYNLL2Q96FJ2 89 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 DEPDC7Q96QD5 511 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 RIOK1Q9BRS2 568 aaKnown RBP5.52□□□□□ -1.53
ATXN3-243ENST00000556671 BTBD2Q9BX70 525 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 AMNQ9BXJ7 453 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 NACAP1Q9BZK3 213 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 DIAPH3Q9NSV4 1193 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 ATP8A2Q9NTI2 1148 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 STAP2Q9UGK3 403 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 SERPINB13Q9UIV8 391 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 ISY1Q9ULR0 285 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms