RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 BRCC3P46736 316 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SMTNP53814 917 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 ARPP19P56211 112 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 NTHL1P78549 312 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SOX4Q06945 474 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 DHX8Q14562 1220 aaKnown RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 NR6A1Q15406 480 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 UPP1Q16831 310 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SEZ6Q53EL9 994 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 AXDND1Q5T1B0 1012 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 LARP1BQ659C4 914 aaKnown RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 MPZL3Q6UWV2 235 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 ASCL5Q7RTU5 278 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 TAS1R3Q7RTX0 852 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SLC44A3Q8N4M1 653 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 RASSF8Q8NHQ8 419 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SLC7A14Q8TBB6 771 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 EPS8L1Q8TE68 723 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 BICD1Q96G01 975 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 ZBTB45Q96K62 511 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 UROC1Q96N76 676 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 ACAP3Q96P50 834 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 PNMA5Q96PV4 448 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 RHOBTB2Q9BYZ6 727 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 IRF2BPLQ9H1B7 796 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 C17orf75Q9HAS0 396 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SLC38A7Q9NVC3 462 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 EVA1BQ9NVM1 165 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 ARHGAP28Q9P2N2 729 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 EPS15L1Q9UBC2 864 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 FBXW11Q9UKB1 542 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 CA14Q9ULX7 337 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 NUB1Q9Y5A7 615 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 CDY1Q9Y6F8 540 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 MIA3Q5JRA6 1907 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 FRYLO94915 3013 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 OTOGLQ3ZCN5 2332 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 TMEM189-UBE2V1I3L0A0 370 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 PODXLO00592 558 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 CLDN3O15551 220 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 PI15O43692 258 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 XYLBO75191 536 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 KRT18P05783 430 aaKnown RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 HNRNPA1P09651 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 PLA2G4BP0C869 781 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 MCF2P10911 925 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 PLS3P13797 630 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 UBA7P41226 1012 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 MCM2P49736 904 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 CLCN5P51795 746 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 SLC12A3P55017 1021 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 SPAG1Q07617 926 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 RAB33AQ14088 237 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 NOLC1Q14978 699 aaKnown RBP eCLIP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 CWF19L1Q69YN2 538 aaKnown RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 RSPO2Q6UXX9 243 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 ANKS3Q6ZW76 656 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 GPBP1Q86WP2 473 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 SYT2Q8N9I0 419 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 C3orf58Q8NDZ4 430 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 GPR152Q8TDT2 470 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 C18orf25Q96B23 403 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 CALML4Q96GE6 196 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 ZMAT2Q96NC0 199 aaKnown RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 TIPINQ9BVW5 301 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 ZHX3Q9H4I2 956 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 PTPRHQ9HD43 1115 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 HCFC1R1Q9NWW0 138 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 MTRRQ9UBK8 725 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-216ENST00000556066 NUMBLQ9Y6R0 609 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 TCHHQ07283 1943 aa7.31□□□□□ -1.24
PSEN1-216ENST00000556066 CACNA1IQ9P0X4 2223 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 VPS37CA5D8V6 355 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 KRBA1A5PL33 1030 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 PRRG1O14668 218 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 TOM1L1O75674 476 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 FAM13AO94988 1023 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 CCNYL3P0C7X3 344 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 MAPTP10636 758 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 SRFP11831 508 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 KCNE1P15382 129 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 NPR3P17342 541 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 AOC1P19801 751 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 PROZP22891 400 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 ELF1P32519 619 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 MCM4P33991 863 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 HTR4Q13639 388 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 UVSSAQ2YD98 709 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 TMEM119Q4V9L6 283 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 PABPC1LQ4VXU2 614 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 XKR4Q5GH76 650 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 SPECC1Q5M775 1068 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 HYIQ5T013 277 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 ARL6IP4Q66PJ3 421 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 PARM1Q6UWI2 310 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 CD300LGQ6UXG3 332 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 ALKAL1Q6UXT8 129 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms