RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 MIOSQ9NXC5 875 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 AIPL1Q9NZN9 384 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 NUB1Q9Y5A7 615 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 BZW2Q9Y6E2 419 aaKnown RBP15.41■□□□□ 0.06
SHOX2-206ENST00000554685 SCN5AQ14524 2016 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 LRRN2O75325 713 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 FECHP22830 423 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 BPIFB4P59827 614 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 CDK17Q00537 523 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 MEA1Q16626 185 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 CYP26C1Q6V0L0 522 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHOX2-206ENST00000554685 TMTC1Q8IUR5 882 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 LRRC43Q8N309 656 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 TOP1MTQ969P6 601 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 KREMEN1Q96MU8 473 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 CASD1Q96PB1 797 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 BCO2Q9BYV7 579 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHOX2-206ENST00000554685 TBC1D13Q9NVG8 400 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
SHOX2-206ENST00000554685 NXF1Q9UBU9 619 aaKnown RBP15.4■□□□□ 0.06
SHOX2-206ENST00000554685 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
SHOX2-206ENST00000554685 CASTOR2A6NHX0 329 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 TBKBP1A7MCY6 615 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 KPNA7A9QM74 516 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 RNF225M0QZC1 329 aaPredicted RBP15.39■□□□□ 0.05
SHOX2-206ENST00000554685 SERPING1P05155 500 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 ACRP10323 421 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 ANXA13P27216 316 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 ASPAP45381 313 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 AFF1P51825 1210 aaKnown RBP15.39■□□□□ 0.05
SHOX2-206ENST00000554685 DSC1Q08554 894 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 GOLGA8FQ08AF8 430 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 GOLGA8DPQ0D2H9 430 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 UPP1Q16831 310 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 DPH6Q7L8W6 267 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM175Q9BSA9 504 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
SHOX2-206ENST00000554685 AJAP1Q9UKB5 411 aaPredicted RBP15.39■□□□□ 0.05
SHOX2-206ENST00000554685 LTBP2Q14767 1821 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 MICAL3Q7RTP6 2002 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 ZBBXA8MT70 800 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 HUS1O60921 280 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 DGKIO75912 1065 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 UPP2O95045 317 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 KRT5P13647 590 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 SYN1P17600 705 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 USP8P40818 1118 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 PRKCIP41743 596 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 CLCNKBP51801 687 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 LILRA4P59901 499 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 KLHL30Q0D2K2 578 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 TDRD12Q587J7 1177 aaKnown RBP15.38■□□□□ 0.05
SHOX2-206ENST00000554685 DCLRE1AQ6PJP8 1040 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 SCARA5Q6ZMJ2 495 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 ZNF365Q70YC5 407 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 VPS36Q86VN1 386 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 TOP6BLQ8N6T0 577 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 KAT5Q92993 513 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 MMS19Q96T76 1030 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 ZMYND8Q9ULU4 1186 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-206ENST00000554685 CNTN6Q9UQ52 1028 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 PCDHB4Q9Y5E5 795 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 SNX9Q9Y5X1 595 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 TTC3P53804 2025 aa15.38■□□□□ 0.05
SHOX2-206ENST00000554685 TET1Q8NFU7 2136 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM189-UBE2V1I3L0A0 370 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 FOXN3O00409 490 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-206ENST00000554685 PPEF2O14830 753 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 ARHGAP6O43182 974 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 GFPT2O94808 682 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 SKILP12757 684 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM240Q5SV17 173 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 OTOP2Q7RTS6 562 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 COLGALT2Q8IYK4 626 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 CMTR2Q8IYT2 770 aaKnown RBP15.37■□□□□ 0.05
SHOX2-206ENST00000554685 CCDC170Q8IYT3 715 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 APPL2Q8NEU8 664 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 SPATA18Q8TC71 538 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 HERVK_113Q902F9 699 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 SLC9A7Q96T83 725 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 ARID3AQ99856 593 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 COLEC11Q9BWP8 271 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 DEF6Q9H4E7 631 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 POLIQ9UNA4 740 aa15.37■□□□□ 0.05
SHOX2-206ENST00000554685 TRAPPC3O43617 180 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 TACC1O75410 805 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 B3GAT3O94766 335 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 ACO1P21399 889 aaKnown RBP15.36■□□□□ 0.05
SHOX2-206ENST00000554685 CYLC1P35663 651 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-206ENST00000554685 OR1G1P47890 313 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 PDE6CP51160 858 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 DEFB103AP81534 67 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms