RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 DDX12PQ92771 950 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 ZSWIM3Q96MP5 696 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 LTB4R2Q9NPC1 389 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 GDE1Q9NZC3 331 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 CEP72Q9P209 647 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
SHMT2-215ENST00000554656 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 NUB1Q9Y5A7 615 aa11.52□□□□□ -0.57
SHMT2-215ENST00000554656 NUP210Q8TEM1 1887 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-215ENST00000554656 KIF26AQ9ULI4 1882 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-215ENST00000554656 A0A1W2PQ27 194 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 A0A1W2PQ64 194 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 A0A1W2PQD8 194 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 PPEF2O14830 753 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 PPP6R2O75170 966 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 GADD45BO75293 160 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-215ENST00000554656 LMNAP02545 664 aaKnown RBP11.51□□□□□ -0.57
SHMT2-215ENST00000554656 LRG1P02750 347 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 PTPN2P17706 415 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 LRPAP1P30533 357 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 AARSP49588 968 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-215ENST00000554656 PRKCQQ04759 706 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 GRIN1Q05586 938 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 ADCY1Q08828 1119 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 STRN3Q13033 797 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 FZD5Q13467 585 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 STK38Q15208 465 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 ZBTB6Q15916 424 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 FAM78AQ5JUQ0 283 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF280DQ6N043 979 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 SLC39A4Q6P5W5 647 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 RNF19BQ6ZMZ0 732 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 BEST2Q8NFU1 509 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 KCNN1Q92952 543 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 SHDQ96IW2 340 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 REEP2Q9BRK0 252 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 CRISPLD1Q9H336 500 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 HEBP1Q9NRV9 189 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
SHMT2-215ENST00000554656 DENND4CQ5VZ89 1909 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 FAM170BA6NMN3 283 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 H7C4K7 107 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 M0QZQ0 153 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 SPTLC2O15270 562 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 CLDN3O15551 220 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 OR4Q2P0C623 313 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 GJA1P17302 382 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 ELF1P32519 619 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 EPHA5P54756 1037 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 PFKPQ01813 784 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 TWF1Q12792 350 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 GRM2Q14416 872 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 ENOX2Q16206 610 aaKnown RBP11.5□□□□□ -0.57
SHMT2-215ENST00000554656 ARL6IP4Q66PJ3 421 aaKnown RBP11.5□□□□□ -0.57
SHMT2-215ENST00000554656 TPGS2Q68CL5 300 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 ADALQ6DHV7 355 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 VITQ6UXI7 678 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 HAUS6Q7Z4H7 955 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 SUMF1Q8NBK3 374 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 CLDN23Q96B33 292 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 ELSPBP1Q96BH3 223 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 ASB16Q96NS5 453 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 FIZ1Q96SL8 496 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 OSBPL6Q9BZF3 934 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 SEMA4AQ9H3S1 761 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 AFF4Q9UHB7 1163 aaKnown RBP11.5□□□□□ -0.57
SHMT2-215ENST00000554656 YIPF1Q9Y548 306 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 TIMM13Q9Y5L4 95 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-215ENST00000554656 OBSL1O75147 1896 aa11.5□□□□□ -0.57
SHMT2-215ENST00000554656 DNAH14Q0VDD8 3507 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 LACTBL1A8MY62 500 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 OAZ2O95190 189 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 LETM1O95202 739 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-215ENST00000554656 PIGRP01833 764 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 ADRB2P07550 413 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 CLTAP09496 248 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF131P52739 623 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 SMTNP53814 917 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF445P59923 1031 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 MCM6Q14566 821 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 GSE1Q14687 1217 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 PTPAQ15257 358 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 SF3A1Q15459 793 aaKnown RBP11.49□□□□□ -0.57
SHMT2-215ENST00000554656 GPBP1Q86WP2 473 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 TMC8Q8IU68 726 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 TTC9BQ8N6N2 239 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 SHKBP1Q8TBC3 707 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 RSPRY1Q96DX4 576 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 BICD1Q96G01 975 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 TMEM209Q96SK2 561 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 LRRC3Q9BY71 257 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms