RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RTL1A6NKG5 1358 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TRBV23-1A0A0A0MS06 115 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TRIM64CA6NLI5 447 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 ERLIN1O75477 346 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 DDNO94850 711 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 SNUPNO95149 360 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 SMC2O95347 1197 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TGFB3P10600 412 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TGM1P22735 817 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 HOXD10P28358 340 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 DNM2P50570 870 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 HERVK_113P62684 666 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 ST5P78524 1137 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 HGFACQ04756 655 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 PRPF4BQ13523 1007 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 CRY1Q16526 586 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 SMN1Q16637 294 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 GIMAP6Q6P9H5 292 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC80Q76M96 950 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC186Q7Z3E2 898 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TTC30AQ86WT1 665 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 CCAR1Q8IX12 1150 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 DRC7Q8IY82 874 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 GIMAP1Q8WWP7 306 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TCP11Q8WWU5 503 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 DNAAF4Q8WXU2 420 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 UBXN4Q92575 508 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 ZNF669Q96BR6 464 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TMEM176AQ96HP8 235 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 GPR101Q96P66 508 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 CDC5LQ99459 802 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TRIM55Q9BYV6 548 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 OR10A2Q9H208 303 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 TMX1Q9H3N1 280 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 MMRN2Q9H8L6 949 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 A1CFQ9NQ94 594 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 MAP3K20Q9NYL2 800 aaKnown RBP4.97□□□□□ -1.61
ATXN3-227ENST00000554491 POLKQ9UBT6 870 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 IKBKGQ9Y6K9 419 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 SCINQ9Y6U3 715 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 SLX4Q8IY92 1834 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 A0A0G2JNJ9 132 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 DIAPH1O60610 1272 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CLASP2O75122 1294 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 E2F6O75461 281 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CRTAMO95727 393 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF24P17028 368 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 STAT5BP51692 787 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 SUMO1P63165 101 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 MOGSQ13724 837 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 TUBA3CQ13748 450 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 GRM7Q14831 915 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CRYMQ14894 314 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 NAIF1Q69YI7 327 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 TMEM200BQ69YZ2 307 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 TTC19Q6DKK2 380 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 TUBA3EQ6PEY2 450 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CCDC174Q6PII3 467 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 KCNV1Q6PIU1 500 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 SDCCAG8Q86SQ7 713 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 NME9Q86XW9 330 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 TEX11Q8IYF3 940 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 RTKN2Q8IZC4 609 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CISD2Q8N5K1 135 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 MIPOL1Q8TD10 442 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 NEK9Q8TD19 979 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 PPM1EQ8WY54 764 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 PIGBQ92521 554 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 IP6K1Q92551 441 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 TAF4BQ92750 862 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CDK5RAP3Q96JB5 506 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 MPP4Q96JB8 637 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 EXOC2Q96KP1 924 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 MAK16Q9BXY0 300 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 OR10A5Q9H207 317 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 DIAPH3Q9NSV4 1193 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 EXOC1Q9NV70 894 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 QPCTLQ9NXS2 382 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 SPATA7Q9P0W8 599 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 RABL2AQ9UBK7 228 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 CLIP2Q9UDT6 1046 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 Q9UFV3 132 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 FAM184BQ9ULE4 1060 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 NUDCQ9Y266 331 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 ITM2BQ9Y287 266 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 MSRB2Q9Y3D2 182 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 EDC4Q6P2E9 1401 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 MAP3K19Q56UN5 1328 aa4.96□□□□□ -1.62
ATXN3-227ENST00000554491 USP42Q9H9J4 1324 aaKnown RBP4.96□□□□□ -1.62
ATXN3-227ENST00000554491 KIF20BQ96Q89 1820 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 CARMIL3Q8ND23 1372 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 PABPN1LA6NDY0 278 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 POLRMTO00411 1230 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 CYP27B1O15528 508 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 PDPK1O15530 556 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 ZSCAN9O15535 394 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 SLC26A4O43511 780 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 BBOX1O75936 387 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 NEBLO76041 1014 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 PECAM1P16284 738 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms