RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 LENG9Q96B70 501 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 ZFYVE19Q96K21 471 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 TMEM209Q96SK2 561 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 RIT2Q99578 217 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 NUSAP1Q9BXS6 441 aaKnown RBP18.59■□□□□ 0.57
NEK9-204ENST00000554258 GPR88Q9GZN0 384 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 CYP4F11Q9HBI6 524 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 ADAMTS9Q9P2N4 1935 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 UPK3BL1B0FP48 263 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 UPK3BL2E5RIL1 263 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 MSH4O15457 936 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 FAM193AP78312 1265 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 ROR1Q01973 937 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 GRSF1Q12849 480 aaKnown RBP eCLIP18.58■□□□□ 0.563e-7■□□□□ 8
NEK9-204ENST00000554258 PCBP1Q15365 356 aaKnown RBP eCLIP18.58■□□□□ 0.56
NEK9-204ENST00000554258 TEAD2Q15562 447 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 NPY5RQ15761 445 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 ARHGAP29Q52LW3 1261 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 TRIM61Q5EBN2 209 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 ANKS3Q6ZW76 656 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 ANO5Q75V66 913 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 C11orf74Q86VG3 221 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 RDM1Q8NG50 284 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 CCDC12Q8WUD4 166 aaPredicted RBP18.58■□□□□ 0.56
NEK9-204ENST00000554258 ZNF512Q96ME7 567 aaPredicted RBP18.58■□□□□ 0.56
NEK9-204ENST00000554258 ASAH2Q9NR71 780 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 VPS54Q9P1Q0 977 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 EVLQ9UI08 416 aaPredicted RBP18.58■□□□□ 0.56
NEK9-204ENST00000554258 INVSQ9Y283 1065 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 KIF3AQ9Y496 699 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 INSL5Q9Y5Q6 135 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 PTPN13Q12923 2485 aa18.58■□□□□ 0.56
NEK9-204ENST00000554258 GOLGA4Q13439 2230 aaKnown RBP18.57■□□□□ 0.56
NEK9-204ENST00000554258 NPTXRO95502 500 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 APBB3O95704 486 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 ANP32AP39687 249 aaKnown RBP18.57■□□□□ 0.56
NEK9-204ENST00000554258 GALNT17Q6IS24 598 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 CCNI2Q6ZMN8 369 aaPredicted RBP18.57■□□□□ 0.56
NEK9-204ENST00000554258 GPIHBP1Q8IV16 184 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 TCEAL8Q8IYN2 117 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 LEMD2Q8NC56 503 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 DAGLBQ8NCG7 672 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 CCDC148Q8NFR7 591 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 FBXO18Q8NFZ0 1043 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 CRELD1Q96HD1 420 aa18.57■□□□□ 0.56
NEK9-204ENST00000554258 INO80B-WBP1J3KQ70 363 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 J3QKU1 62 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 XBP1P17861 261 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 CIITAP33076 1130 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 DHPSP49366 369 aaPredicted RBP18.56■□□□□ 0.56
NEK9-204ENST00000554258 TNK2Q07912 1038 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 HDDC3Q8N4P3 179 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 FAM184AQ8NB25 1140 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 GJA10Q969M2 543 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 DDX27Q96GQ7 796 aaKnown RBP18.56■□□□□ 0.56
NEK9-204ENST00000554258 BMP2KQ9NSY1 1161 aaPredicted RBP18.56■□□□□ 0.56
NEK9-204ENST00000554258 GJB4Q9NTQ9 266 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 EBF1Q9UH73 591 aa18.56■□□□□ 0.56
NEK9-204ENST00000554258 NUP210Q8TEM1 1887 aaPredicted RBP18.56■□□□□ 0.56
NEK9-204ENST00000554258 M0R2N6 131 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 DPYSL4O14531 572 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ASAP2O43150 1006 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 RNF40O75150 1001 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ABLIM3O94929 683 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 SEC24AO95486 1093 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ATF2P15336 505 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ENGP17813 658 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ARF4P18085 180 aaPredicted RBP18.55■□□□□ 0.56
NEK9-204ENST00000554258 TKTP29401 623 aaKnown RBP18.55■□□□□ 0.56
NEK9-204ENST00000554258 GNA11P29992 359 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 DGKEP52429 567 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 NPEPPSP55786 919 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ARPP19P56211 112 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ITPRIPL2Q3MIP1 535 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 TMEM196Q5HYL7 178 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 FSTL4Q6MZW2 842 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 EXOC8Q8IYI6 725 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 SHKBP1Q8TBC3 707 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 SLC5A5Q92911 643 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 HNRNPABQ99729 332 aaKnown RBP18.55■□□□□ 0.56
NEK9-204ENST00000554258 C6orf50Q9HD87 102 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 PTPRBP23467 1997 aa18.55■□□□□ 0.56
NEK9-204ENST00000554258 ADAMTS3O15072 1205 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 ATXN7O15265 892 aaPredicted RBP18.54■□□□□ 0.56
NEK9-204ENST00000554258 PRKCBP05771 671 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 THP07101 528 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 EPHA5P54756 1037 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 PTPAQ15257 358 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 USP39Q53GS9 565 aaKnown RBP18.54■□□□□ 0.56
NEK9-204ENST00000554258 SLC8B1Q6J4K2 584 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 SLC27A1Q6PCB7 646 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 FERMT3Q86UX7 667 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 CDR2LQ86X02 465 aaPredicted RBP18.54■□□□□ 0.56
NEK9-204ENST00000554258 ARID3BQ8IVW6 561 aaPredicted RBP18.54■□□□□ 0.56
NEK9-204ENST00000554258 REXO1Q8N1G1 1221 aaKnown RBP18.54■□□□□ 0.56
NEK9-204ENST00000554258 TCP11Q8WWU5 503 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 C8orf76Q96K31 380 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 DHX33Q9H6R0 707 aaKnown RBP18.54■□□□□ 0.56
NEK9-204ENST00000554258 CEP72Q9P209 647 aa18.54■□□□□ 0.56
NEK9-204ENST00000554258 PCDHA4Q9UN74 947 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms