RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ICAM3P32942 547 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RFC5P40937 340 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MAPK8P45983 427 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MTIF2P46199 727 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RAP1GAPP47736 663 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RGS7P49802 495 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 EPHB3P54753 998 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 PTENP60484 403 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ERVK-21P61565 698 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CSTF1Q05048 431 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TNK2Q07912 1038 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FUT2Q10981 343 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 STIM1Q13586 685 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MTMR3Q13615 1198 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 COL9A2Q14055 689 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 LLGL1Q15334 1064 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SYCP1Q15431 976 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 NFKBIBQ15653 356 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ECM1Q16610 540 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TXNDC8Q6A555 127 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF280DQ6N043 979 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TPRG1Q6ZUI0 275 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 NYAP1Q6ZVC0 841 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 OTOP3Q7RTS5 596 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 DDX53Q86TM3 631 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF366Q8N895 744 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GLIS3Q8NEA6 775 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ATXN2LQ8WWM7 1075 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MRPS31Q92665 395 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SLC5A5Q92911 643 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SENP8Q96LD8 212 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FBXL18Q96ME1 805 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 LRFN3Q9BTN0 628 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 C1QTNF1Q9BXJ1 281 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 BCO2Q9BYV7 579 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 BACH2Q9BYV9 841 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RHOBTB2Q9BYZ6 727 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MAF1Q9H063 256 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 EBF3Q9H4W6 596 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ZFP14Q9HCL3 533 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 XPNPEP1Q9NQW7 623 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ASAH2Q9NR71 780 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 KCNH3Q9ULD8 1083 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 EXOC7Q9UPT5 735 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ECM29Q5VYK3 1845 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FRYLO94915 3013 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TECTAO75443 2155 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SMIM28A0A1B0GU29 152 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MACROD2A1Z1Q3 448 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GOLGA6CA6NDK9 693 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GOLGA6BA6NDN3 693 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF233A6NK53 670 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TMCO5BA8MYB1 307 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 C2CD4DB7Z1M9 353 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CLDN5O00501 218 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 PPEF2O14830 753 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TGM5O43548 720 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TSPAN3O60637 253 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ATP2C2O75185 946 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 NEBLO76041 1014 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 NFICP08651 508 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GOLGA6DP0CG33 693 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MBL2P11226 248 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 HDCP19113 662 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CYP2F1P24903 491 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RPA1P27694 616 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 PIK3CAP42336 1068 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 EFNA5P52803 228 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SLC8A3P57103 927 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CREB5Q02930 508 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 PTPN11Q06124 597 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MYO1EQ12965 1108 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TUSC3Q13454 348 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ODF2Q5BJF6 829 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 WDR44Q5JSH3 913 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 STXBP5Q5T5C0 1151 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 JADE1Q6IE81 842 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SPOPLQ6IQ16 392 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 KIAA1324Q6UXG2 1013 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SRGAP1Q7Z6B7 1085 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ADAT2Q7Z6V5 191 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CBWD2Q8IUF1 395 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 C4orf19Q8IY42 314 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 DRC7Q8IY82 874 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MRPL43Q8N983 215 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 APPL2Q8NEU8 664 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ITFG1Q8TB96 612 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 LINC01599Q8WXQ3 324 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CASP10Q92851 521 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TCEAL4Q96EI5 215 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RNF31Q96EP0 1072 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SIK2Q9H0K1 926 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 DNAJC25Q9H1X3 360 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CDT1Q9H211 546 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FOXP1Q9H334 677 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 KCNK12Q9HB15 430 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ERVK-5Q9HDB9 667 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SH3GLB2Q9NR46 395 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 DDX43Q9NXZ2 648 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms