RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 FNBP1Q96RU3 617 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 MTMR12Q9C0I1 747 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 SFXN1Q9H9B4 322 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 INTS13Q9NVM9 706 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 AGAP1Q9UPQ3 857 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 TIMM13Q9Y5L4 95 aaPredicted RBP25.13■■□□□ 1.61
NEK9-203ENST00000553945 PTPRJQ12913 1337 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 C1RP00736 705 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 TNNC2P02585 160 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 POLR2BP30876 1174 aaKnown RBP25.12■■□□□ 1.61
NEK9-203ENST00000553945 TAF6P49848 677 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 MRPL58Q14197 206 aaKnown RBP25.12■■□□□ 1.61
NEK9-203ENST00000553945 PSMD6Q15008 389 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 LILRA6Q6PI73 481 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 TMC5Q6UXY8 1006 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 WDR49Q8IV35 697 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 CSGALNACT2Q8N6G5 542 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 OR5B17Q8NGF7 314 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 SENP8Q96LD8 212 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 ADAM7Q9H2U9 754 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 ITGA11Q9UKX5 1188 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 TRAF3IP3Q9Y228 551 aa25.12■■□□□ 1.61
NEK9-203ENST00000553945 KRT19P08727 400 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 ODC1P11926 461 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 YWHAHQ04917 246 aaPredicted RBP25.11■■□□□ 1.61
NEK9-203ENST00000553945 ITIH3Q06033 890 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 RAB33AQ14088 237 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 DUOXA2Q1HG44 320 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 SV2CQ496J9 727 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 CTXN3Q4LDR2 81 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 ZNF280DQ6N043 979 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 USP37Q86T82 979 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 KREMEN2Q8NCW0 462 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 MFSD14AQ96MC6 490 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 ZNF560Q96MR9 790 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 POP1Q99575 1024 aaKnown RBP25.11■■□□□ 1.61
NEK9-203ENST00000553945 PLEKHA4Q9H4M7 779 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 CDH22Q9UJ99 828 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 SCN1AP35498 2009 aa25.11■■□□□ 1.61
NEK9-203ENST00000553945 WEE2P0C1S8 567 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 TNNI1P19237 187 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 PRCPP42785 496 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 ARPP19P56211 112 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 MYBPC2Q14324 1141 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 CEP135Q66GS9 1140 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 ISM2Q6H9L7 571 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 CLEC17AQ6ZS10 378 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 HDAC7Q8WUI4 952 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 TMEM174Q8WUU8 243 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 SUSD6Q92537 303 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 CGRRF1Q99675 332 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 FBXL5Q9UKA1 691 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 MAN1B1Q9UKM7 699 aa25.1■■□□□ 1.61
NEK9-203ENST00000553945 R3HCC1Q9Y3T6 440 aaKnown RBP25.1■■□□□ 1.61
NEK9-203ENST00000553945 MTCL1Q9Y4B5 1905 aaKnown RBP25.1■■□□□ 1.61
NEK9-203ENST00000553945 DLL1O00548 723 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 CYB561D2O14569 222 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 TBC1D4O60343 1298 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 PNPLA4P41247 253 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 CASP4P49662 377 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 RBP5P82980 135 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 CBX2Q14781 532 aaPredicted RBP25.09■■□□□ 1.61
NEK9-203ENST00000553945 SCARA3Q6AZY7 606 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 SLC8B1Q6J4K2 584 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 GTPBP4Q9BZE4 634 aaKnown RBP25.09■■□□□ 1.61
NEK9-203ENST00000553945 SIX4Q9UIU6 781 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 FBXW11Q9UKB1 542 aa25.09■■□□□ 1.61
NEK9-203ENST00000553945 CCDC195A0A1B0GUA6 201 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 ARHGEF37A1IGU5 675 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 KPNA7A9QM74 516 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 RFPL2O75678 378 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 TYMPP19971 482 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 NR2F2P24468 414 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 ROR1Q01973 937 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 BFSP1Q12934 665 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 LIN9Q5TKA1 542 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 OVOS1Q6IE37 1185 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 LRRC52Q8N7C0 313 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 FEZF2Q8TBJ5 459 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 RIPOR3Q96MK2 946 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 GBP4Q96PP9 640 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 PRKAG3Q9UGI9 489 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 FRMD4BQ9Y2L6 1034 aa25.08■■□□□ 1.61
NEK9-203ENST00000553945 OAZ2O95190 189 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 RPL13P26373 211 aaKnown RBP25.07■■□□□ 1.6
NEK9-203ENST00000553945 MTHFRP42898 656 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 NFIL3Q16649 462 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 ZCWPW2Q504Y3 356 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 ATAT1Q5SQI0 421 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 TRAPPC11Q7Z392 1133 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 GPR149Q86SP6 731 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 METTL23Q86XA0 190 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 ADHFE1Q8IWW8 467 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 CMASQ8NFW8 434 aaPredicted RBP25.07■■□□□ 1.6
NEK9-203ENST00000553945 CXorf38Q8TB03 319 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 BORCS6Q96GS4 357 aa25.07■■□□□ 1.6
NEK9-203ENST00000553945 GZF1Q9H116 711 aaPredicted RBP25.07■■□□□ 1.6
NEK9-203ENST00000553945 ZP2Q05996 745 aa25.06■■□□□ 1.6
NEK9-203ENST00000553945 CAMK4Q16566 473 aa25.06■■□□□ 1.6
NEK9-203ENST00000553945 COBLL1Q53SF7 1204 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms