RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
CHD8-206ENST00000553870 SLC8B1Q6J4K2 584 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 ANKRD54Q6NXT1 300 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 LILRA6Q6PI73 481 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 DSTYKQ6XUX3 929 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 EP400NLQ6ZTU2 488 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 INTS8Q75QN2 995 aaKnown RBP10.08□□□□□ -0.8
CHD8-206ENST00000553870 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 C1orf127Q8N9H9 656 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 PARD3BQ8TEW8 1205 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 SENP8Q96LD8 212 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 CGRRF1Q99675 332 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 CLSTN3Q9BQT9 956 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 RHOBTB2Q9BYZ6 727 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 CLSTN2Q9H4D0 955 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 MAPK8IP1Q9UQF2 711 aa10.08□□□□□ -0.8
CHD8-206ENST00000553870 PDCD11Q14690 1871 aaKnown RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 BICDL2A1A5D9 508 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 GRXCR2A6NFK2 248 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 KPNA7A9QM74 516 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 I3L4J1 428 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 LINC01565O15544 149 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 TBX10O75333 385 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 PAPLNO95428 1278 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 GLP2RO95838 553 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 CYP11A1P05108 521 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 DLATP10515 647 aaKnown RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 ODC1P11926 461 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 BMP1P13497 986 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 CCNE1P24864 410 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 GUCY2FP51841 1108 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 WNT7BP56706 349 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 YWHAHQ04917 246 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 DLX2Q07687 328 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 TPGS2Q68CL5 300 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 ZNF280DQ6N043 979 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 PRSS55Q6UWB4 352 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 TRAPPC11Q7Z392 1133 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 SMYD4Q8IYR2 804 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 SMRP1Q8NCR6 262 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 CMASQ8NFW8 434 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 VN1R2Q8NFZ6 395 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 ZNF461Q8TAF7 563 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 CXorf38Q8TB03 319 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 ERCC4Q92889 916 aaPredicted RBP10.07□□□□□ -0.8
CHD8-206ENST00000553870 CCDC127Q96BQ5 260 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 BORCS6Q96GS4 357 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 B3GALT6Q96L58 329 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 S1PR5Q9H228 398 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 ADAM7Q9H2U9 754 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 GDAP2Q9NXN4 497 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 AGAP1Q9UPQ3 857 aa10.07□□□□□ -0.8
CHD8-206ENST00000553870 COL6A3P12111 3177 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 H3BQ06 376 aaPredicted RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 CYB561D2O14569 222 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 PPEF2O14830 753 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 SPTLC1O15269 473 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 SLC16A3O15427 465 aaKnown RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 MBTPS2O43462 519 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 TGM5O43548 720 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 HUS1O60921 280 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 ABLIM3O94929 683 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 MBD3O95983 291 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 ITGB3P05106 788 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 KRT13P13646 458 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 EPCAMP16422 314 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 POLR2BP30876 1174 aaKnown RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 ATICP31939 592 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 GTF2H1P32780 548 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 OR1D2P34982 312 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 CASP4P49662 377 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 TFF2Q03403 129 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 SMAD2Q15796 467 aaKnown RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 CAMK4Q16566 473 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 CTXN3Q4LDR2 81 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 ATAT1Q5SQI0 421 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 CEP135Q66GS9 1140 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 CES5AQ6NT32 575 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 SYCE2Q6PIF2 218 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 C15orf39Q6ZRI6 1047 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 METTL23Q86XA0 190 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 PALB2Q86YC2 1186 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 ZC3H3Q8IXZ2 948 aaKnown RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 THEM5Q8N1Q8 247 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 TMEM86AQ8N2M4 240 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 TOP6BLQ8N6T0 577 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 MLKLQ8NB16 471 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 KREMEN2Q8NCW0 462 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 OR5B17Q8NGF7 314 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 NECTIN4Q96NY8 510 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms