RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 LRRIQ3A6PVS8 624 aaPredicted RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 H3BQ06 376 aaPredicted RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 C2CD2LO14523 706 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 TRAPPC3O43617 180 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 EXOC3O60645 756 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 STAU1O95793 577 aaKnown RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 RPL17P18621 184 aaKnown RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 TYMPP19971 482 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 MCM4P33991 863 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 NDUFV1P49821 464 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 DLG4P78352 724 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 TFAMQ00059 246 aaKnown RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 CREMQ03060 361 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 RAB33AQ14088 237 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 SURF1Q15526 300 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 PSMD5Q16401 504 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 LMBRD2Q68DH5 695 aaPredicted RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 PDXDC1Q6P996 788 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 CASP10Q92851 521 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 POP1Q99575 1024 aaKnown RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 DUSP9Q99956 384 aaKnown RBP10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 RTP3Q9BQQ7 232 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 MKNK1Q9BUB5 465 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 EMILIN2Q9BXX0 1053 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 RHOBTB2Q9BYZ6 727 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 XYLT2Q9H1B5 865 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 IGFLR1Q9H665 355 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 GDAP2Q9NXN4 497 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 FBXW11Q9UKB1 542 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 MUC6Q6W4X9 2439 aa10.93□□□□□ -0.66
CALCOCO1-222ENST00000553154 XIRP2A4UGR9 3374 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 MYO9BQ13459 2157 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 PLXNA3P51805 1871 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 TRIM49BA6NDI0 452 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 MBTPS2O43462 519 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 TGM5O43548 720 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 CALUO43852 315 aaPredicted RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 VNN2O95498 520 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 C4BPAP04003 597 aaKnown RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 ITGB3P05106 788 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 ADH1AP07327 375 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 HOXB8P17481 243 aaPredicted RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 NR2F2P24468 414 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 CCNE1P24864 410 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 POLR2BP30876 1174 aaKnown RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 MRPS5P82675 430 aaKnown RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 SKIV2LQ15477 1246 aaKnown RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 TDRD10Q5VZ19 366 aaKnown RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 ANKRD40Q6AI12 368 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 ANKS3Q6ZW76 656 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 TRAPPC11Q7Z392 1133 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 PPFIBP1Q86W92 1011 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 CMASQ8NFW8 434 aaPredicted RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 HDAC7Q8WUI4 952 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 DHTKD1Q96HY7 919 aaPredicted RBP10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 SENP8Q96LD8 212 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 DZANK1Q9NVP4 752 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 FBXL5Q9UKA1 691 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 NUB1Q9Y5A7 615 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 BRWD1Q9NSI6 2320 aa10.92□□□□□ -0.66
CALCOCO1-222ENST00000553154 BIN1O00499 593 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 ABLIM3O94929 683 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 VNN1O95497 513 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 PPP1R2P41236 205 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 PNPLA4P41247 253 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 TAF6P49848 677 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 ROR1Q01973 937 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 BMS1Q14692 1282 aaKnown RBP10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 SMAD2Q15796 467 aaKnown RBP10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CAMK4Q16566 473 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 DUOXA2Q1HG44 320 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 ZACNQ401N2 412 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 ISM2Q6H9L7 571 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 KIAA1841Q6NSI8 718 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 OR10T2Q8NGX3 314 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CACTINQ8WUQ7 758 aaKnown RBP10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CCDC127Q96BQ5 260 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 ZNF707Q96C28 371 aaPredicted RBP10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 ZNF560Q96MR9 790 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 PKMYT1Q99640 499 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CD207Q9UJ71 328 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CDH22Q9UJ99 828 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 L1RE1Q9UN81 338 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 AGAP1Q9UPQ3 857 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 USP15Q9Y4E8 981 aaPredicted RBP10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 NME7Q9Y5B8 376 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
CALCOCO1-222ENST00000553154 WDR27A2RRH5 827 aa10.9□□□□□ -0.66
CALCOCO1-222ENST00000553154 KPNA7A9QM74 516 aa10.9□□□□□ -0.66
CALCOCO1-222ENST00000553154 GABRDO14764 452 aa10.9□□□□□ -0.66
CALCOCO1-222ENST00000553154 PSMA7O14818 248 aa10.9□□□□□ -0.66
CALCOCO1-222ENST00000553154 IKBKBO14920 756 aa10.9□□□□□ -0.66
CALCOCO1-222ENST00000553154 SLC16A3O15427 465 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms