RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SH3PXD2AQ5TCZ1 1133 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 Q6ZUG5 572 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 ZCCHC14Q8WYQ9 949 aaKnown RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 UROC1Q96N76 676 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 EDEM2Q9BV94 578 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 POLR3FQ9H1D9 316 aaPredicted RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 DUSP15Q9H1R2 295 aaPredicted RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 THADAQ6YHU6 1953 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 LAMA5O15230 3695 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 CITO14578 2027 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 BCLAF3A2AJT9 711 aaKnown RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 CAPNS1P04632 268 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 EDN1P05305 212 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 MYL4P12829 197 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 ANP32AP39687 249 aaKnown RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 XKR4Q5GH76 650 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 IQCEQ6IPM2 695 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 KCNB2Q92953 911 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 GTSE1Q9NYZ3 720 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 AFF4Q9UHB7 1163 aaKnown RBP12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
SUPT16H-202ENST00000552829 ASXL3Q9C0F0 2248 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 SYN3O14994 580 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 PRKCBP05771 671 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 RARRES1P49788 294 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 TWF1Q12792 350 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 ARHGAP29Q52LW3 1261 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 NCAPH2Q6IBW4 605 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 ALKAL1Q6UXT8 129 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 TMC8Q8IU68 726 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 ARID3BQ8IVW6 561 aaPredicted RBP12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 YAF2Q8IY57 180 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 ELMOD1Q8N336 334 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 BEST2Q8NFU1 509 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 CCDC113Q9H0I3 377 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 GPRC5CQ9NQ84 441 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 ASAH2Q9NR71 780 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 NEUROG3Q9Y4Z2 214 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 ACACAQ13085 2346 aa12.5□□□□□ -0.41
SUPT16H-202ENST00000552829 DENND4CQ5VZ89 1909 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 LNP1A1A4G5 178 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 LRRIQ4A6NIV6 560 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 H7C4K7 107 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 ACKR2O00590 384 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 CDX4O14627 284 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 VNN2O95498 520 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 ARPP19P56211 112 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 FGD1P98174 961 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 SOWAHCQ53LP3 525 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 TMEM196Q5HYL7 178 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 CAMKK1Q8N5S9 505 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 AIFM3Q96NN9 605 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 OBP2AQ9NY56 170 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
SUPT16H-202ENST00000552829 CAVIN2O95810 425 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 WEE1P30291 646 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 CCT2P78371 535 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 TNK2Q07912 1038 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 PRPF4BQ13523 1007 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 DCAF4L1Q3SXM0 396 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 BSNDQ8WZ55 320 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 CHFRQ96EP1 664 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 TMEM209Q96SK2 561 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 ADPGKQ9BRR6 497 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 C2orf40Q9H1Z8 148 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 MSRB2Q9Y3D2 182 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 PTPRDP23468 1912 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 MYO16Q9Y6X6 1858 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms