RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 TYROBPO43914 113 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GAS7O60861 476 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TCEA3O75764 348 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TJP3O95049 919 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ATF2P15336 505 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CA4P22748 312 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PTPN4P29074 926 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SERPINB3P29508 390 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MAGEA4P43358 317 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 RANBP1P43487 201 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 INHBCP55103 352 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CDR2Q01850 454 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PTK6Q13882 451 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PDK4Q16654 411 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 P3H1Q32P28 736 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GRIPAP1Q4V328 841 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MDH1BQ5I0G3 518 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ODR4Q5SWX8 454 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 IZUMO3Q5VZ72 239 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CDC42EP5Q6NZY7 148 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 LVRNQ6Q4G3 990 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 LRRC74BQ6ZQY2 392 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PPM1KQ8N3J5 372 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SLC25A41Q8N5S1 370 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PTCD3Q96EY7 689 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TRIM4Q9C037 500 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 DCLRE1BQ9H816 532 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 KCNK13Q9HB14 408 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SAYSD1Q9NPB0 183 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ARHGEF4Q9NR80 690 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 OLFML3Q9NRN5 406 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TOPORSQ9NS56 1045 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TAS2R1Q9NYW7 299 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GSTTP1A0A1W2PQM5 241 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ARHGEF35A5YM69 484 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TRAFD1O14545 582 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ECE2O60344 883 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 RAD17O75943 681 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 KRT10P13645 584 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 HSPA6P17066 643 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 KRT15P19012 456 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 KRT4P19013 534 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MUTP22033 750 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GSTT1P30711 240 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SHMT1P34896 483 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 VHLP40337 213 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CCNFP41002 786 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SCNN1BP51168 640 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TAS2R40P59535 323 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MKRN3Q13064 507 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 NR1H3Q13133 447 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SPARCL1Q14515 664 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 HSF5Q4G112 596 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 WASHC2DQ5SRD0 308 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ANKMY2Q8IV38 441 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 FAM178BQ8IXR5 827 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 OGFOD1Q8N543 542 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CPA5Q8WXQ8 436 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SLCO2A1Q92959 643 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CCDC127Q96BQ5 260 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ACSF2Q96CM8 615 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 RBM41Q96IZ5 413 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 FGD4Q96M96 766 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 HSD17B14Q9BPX1 270 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PI4K2AQ9BTU6 479 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 WDR18Q9BV38 432 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MOV10L1Q9BXT6 1211 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF395Q9H8N7 513 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 HEY2Q9UBP5 337 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ANAPC7Q9UJX3 599 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 FRMD4BQ9Y2L6 1034 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MROH7Q68CQ1 1323 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ABCA3Q99758 1704 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 E7ENQ6 273 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PI4K2BG5E9Z4 385 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 hCG_1984214I3L0E3 225 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SORBS2O94875 1100 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PSMG1O95456 288 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GGPS1O95749 300 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CYP1A2P05177 515 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 MYCLP12524 364 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CD58P19256 250 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GRIA2P42262 883 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 NRLP54845 237 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 KLF1Q13351 362 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 THOC5Q13769 683 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CNPY1Q3B7I2 92 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 RC3H1Q5TC82 1133 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CES4AQ5XG92 561 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SCARA3Q6AZY7 606 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 IRGCQ6NXR0 463 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PPP1R21Q6ZMI0 780 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 CROCCP2Q86T23 111 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 FAM71AQ8IYT1 594 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SCYL3Q8IZE3 742 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF713Q8N859 430 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 POMGNT1Q8WZA1 660 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 DDX1Q92499 740 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms