RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TMC5Q6UXY8 1006 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 ANKS3Q6ZW76 656 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 HS2ST1Q7LGA3 356 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 ADHFE1Q8IWW8 467 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 GPR65Q8IYL9 337 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 GPD1LQ8N335 351 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 C12orf76Q8N812 135 aaPredicted RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 FSIP1Q8NA03 581 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 SMRP1Q8NCR6 262 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 APPL2Q8NEU8 664 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 VN1R2Q8NFZ6 395 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 PRR7Q8TB68 274 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 SLC22A17Q8WUG5 538 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 CACTINQ8WUQ7 758 aaKnown RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 KCNN1Q92952 543 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 C18orf25Q96B23 403 aaPredicted RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 ACSF2Q96CM8 615 aaPredicted RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 THAP11Q96EK4 314 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 ZMAT2Q96NC0 199 aaKnown RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 USB1Q9BQ65 265 aaKnown RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 FAM213AQ9BRX8 229 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 PHF7Q9BWX1 381 aaPredicted RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 HAPLN2Q9GZV7 340 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 PLEKHA4Q9H4M7 779 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 PCIF1Q9H4Z3 704 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 ASB7Q9H672 318 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 SFXN1Q9H9B4 322 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 RXFP1Q9HBX9 757 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 CHST7Q9NS84 486 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 CPSF3Q9UKF6 684 aaKnown RBP6.4□□□□□ -1.38
CCDC65-204ENST00000552188 POLIQ9UNA4 740 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 ZDHHC9Q9Y397 364 aa6.4□□□□□ -1.38
CCDC65-204ENST00000552188 BRWD1Q9NSI6 2320 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 REV3LO60673 3130 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 MYH10P35580 1976 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ZNF638Q14966 1978 aaKnown RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SCN1AP35498 2009 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 MYO10Q9HD67 2058 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 PVALEFA0A1B0GWK0 134 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 TTC26A0AVF1 554 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 FRMD3A2A2Y4 597 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 GOLGA8IPA6NC78 632 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ZNF233A6NK53 670 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 GOLGA8JA6NMD2 632 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 TISP43B9A030 160 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CFAP99D6REC4 459 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SYN3O14994 580 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 EIF3DO15371 548 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 EXTL3O43909 919 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 MYL1P05976 194 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 KRT19P08727 400 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 WEE2P0C1S8 567 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 TMEM191BP0C7N4 346 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ODC1P11926 461 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ALADP13716 330 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CPB1P15086 417 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 FGFR3P22607 806 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SP100P23497 879 aaPredicted RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 PAX3P23760 479 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 BRD2P25440 801 aaKnown RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 TKTP29401 623 aaKnown RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CASP1P29466 404 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 OR1D2P34982 312 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CASP5P51878 434 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 TFAMQ00059 246 aaKnown RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SOX4Q06945 474 aaPredicted RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 KCNA1Q09470 495 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 PSMD2Q13200 908 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 KCNC3Q14003 757 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CBX2Q14781 532 aaPredicted RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SURF1Q15526 300 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 TUSC1Q2TAM9 212 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CTXN3Q4LDR2 81 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 RTP2Q5QGT7 225 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 PPM1LQ5SGD2 360 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ZBTB41Q5SVQ8 909 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 JADE1Q6IE81 842 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ZNF280DQ6N043 979 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 KANK3Q6NY19 840 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SLC39A4Q6P5W5 647 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SYCE2Q6PIF2 218 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CCDC149Q6ZUS6 474 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 METTL23Q86XA0 190 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 NELFCDQ8IXH7 590 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 GRAMD1CQ8IYS0 662 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 RNF168Q8IYW5 571 aaPredicted RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 KREMEN2Q8NCW0 462 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 LNX1Q8TBB1 728 aaPredicted RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ZNF507Q8TCN5 953 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 HDAC7Q8WUI4 952 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SMG7Q92540 1137 aaKnown RBP6.39□□□□□ -1.39
CCDC65-204ENST00000552188 HPS3Q969F9 1004 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 SAAL1Q96ER3 474 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 PAGE5Q96GU1 130 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 ANKRD36BP1Q96IX9 119 aa6.39□□□□□ -1.39
CCDC65-204ENST00000552188 CHAMP1Q96JM3 812 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms