RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 ARHGAP29Q52LW3 1261 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 TMC8Q8IU68 726 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 CAMKK1Q8N5S9 505 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 DEFB124Q8NES8 71 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 TMEM209Q96SK2 561 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 HSD17B14Q9BPX1 270 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 NCOA5Q9HCD5 579 aaKnown RBP13.98□□□□□ -0.17
CACNB3-221ENST00000552022 TMEM9BQ9NQ34 198 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 AFF4Q9UHB7 1163 aaKnown RBP13.98□□□□□ -0.17
CACNB3-221ENST00000552022 KLK13Q9UKR3 277 aa13.98□□□□□ -0.17
CACNB3-221ENST00000552022 SMIM28A0A1B0GU29 152 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 H7C4K7 107 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 SYN3O14994 580 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 ATG13O75143 517 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
CACNB3-221ENST00000552022 RARRES1P49788 294 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 ELF2Q15723 593 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 CTXN3Q4LDR2 81 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 TMEM196Q5HYL7 178 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 C19orf48Q6RUI8 117 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 RNF19BQ6ZMZ0 732 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 MAEAQ7L5Y9 396 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 KRT25Q7Z3Z0 450 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 EIF2AK1Q9BQI3 630 aaKnown RBP13.97□□□□□ -0.17
CACNB3-221ENST00000552022 MAFFQ9ULX9 164 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 GPSM3Q9Y4H4 160 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 HELZ2Q9BYK8 2649 aaKnown RBP13.97□□□□□ -0.17
CACNB3-221ENST00000552022 KIAA1549LQ6ZVL6 1849 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 CITO14578 2027 aa13.97□□□□□ -0.17
CACNB3-221ENST00000552022 PATE3B3GLJ2 98 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 KHNYNO15037 678 aaKnown RBP13.96□□□□□ -0.17
CACNB3-221ENST00000552022 VNN2O95498 520 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 CCT2P78371 535 aaKnown RBP13.96□□□□□ -0.17
CACNB3-221ENST00000552022 KRT32Q14532 448 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 ITPRIPL2Q3MIP1 535 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 PROSER1Q86XN7 944 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 PIGOQ8TEQ8 1089 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 CHFRQ96EP1 664 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 HHIPQ96QV1 700 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 ADPGKQ9BRR6 497 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 DNAJC25Q9H1X3 360 aa13.96□□□□□ -0.17
CACNB3-221ENST00000552022 ZNF638Q14966 1978 aaKnown RBP13.96□□□□□ -0.18
CACNB3-221ENST00000552022 DENND4CQ5VZ89 1909 aa13.96□□□□□ -0.18
CACNB3-221ENST00000552022 ACKR2O00590 384 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 PODXLO00592 558 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 DPYSL4O14531 572 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 MARCH6O60337 910 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
CACNB3-221ENST00000552022 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
CACNB3-221ENST00000552022 PDIA3P30101 505 aaKnown RBP13.95□□□□□ -0.18
CACNB3-221ENST00000552022 IRX4P78413 519 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 UAP1L1Q3KQV9 507 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 ALKAL1Q6UXT8 129 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 GAREM2Q75VX8 874 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 NEK8Q86SG6 692 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 PDZD3Q86UT5 571 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 ZBTB8OSQ8IWT0 167 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 BSNDQ8WZ55 320 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 AIFM3Q96NN9 605 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 PTPRDP23468 1912 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 GON4LQ3T8J9 2241 aa13.95□□□□□ -0.18
CACNB3-221ENST00000552022 ADAMTS9Q9P2N4 1935 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 FAM221BA6H8Z2 402 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 OTOL1A6NHN0 477 aaPredicted RBP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 TRDMT1O14717 391 aaKnown RBP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 RNF40O75150 1001 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 EGFP01133 1207 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 GCFC2P16383 781 aaKnown RBP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 LIG1P18858 919 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 GRSF1Q12849 480 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 MAPK6Q16659 721 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 DCAF4L1Q3SXM0 396 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 XKR4Q5GH76 650 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 GALNT17Q6IS24 598 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 BEST2Q8NFU1 509 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 ZMAT2Q96NC0 199 aaKnown RBP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 AGXT2Q9BYV1 514 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 CRISPLD1Q9H336 500 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 FBRSL1Q9HCM7 1045 aaKnown RBP13.94□□□□□ -0.18
CACNB3-221ENST00000552022 EBF1Q9UH73 591 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 INVSQ9Y283 1065 aa13.94□□□□□ -0.18
CACNB3-221ENST00000552022 TNRC6BQ9UPQ9 1833 aaKnown RBP13.93□□□□□ -0.18
CACNB3-221ENST00000552022 SPAARA0A1B0GVQ0 90 aa13.93□□□□□ -0.18
CACNB3-221ENST00000552022 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
CACNB3-221ENST00000552022 CPB1P15086 417 aa13.93□□□□□ -0.18
CACNB3-221ENST00000552022 SSRP1Q08945 709 aaKnown RBP13.93□□□□□ -0.18
CACNB3-221ENST00000552022 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms