RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CHI3L2Q15782 390 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 FASTKD1Q53R41 847 aaKnown RBP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 DDHD1Q8NEL9 900 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 PPP1R36Q96LQ0 422 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 GID8Q9NWU2 228 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ETAA1Q9NY74 926 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 PIM2Q9P1W9 311 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 CHORDC1Q9UHD1 332 aaPredicted RBP16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 PPME1Q9Y570 386 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ARL13BQ3SXY8 428 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 SYCP2LQ5T4T6 812 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 GPD1LQ8N335 351 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 TTC8Q8TAM2 541 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 FAM111AQ96PZ2 611 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 GTF3C4Q9UKN8 822 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 C16orf96A6NNT2 1141 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 CLPTM1O96005 669 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 RALAP11233 206 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 MTM1Q13496 603 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ADRM1Q16186 407 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 CATSPER3Q86XQ3 398 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGEF26Q96DR7 871 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 TUFT1Q9NNX1 390 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 HSPBP1Q9NZL4 362 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 NOD1Q9Y239 953 aa16.59■□□□□ 0.25
RBFOX1-212ENST00000550418 ITGA4P13612 1032 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 SSTR3P32745 418 aaPredicted RBP16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 FLOT2Q14254 428 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 EPHA7Q15375 998 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 FAM102AQ5T9C2 384 aaPredicted RBP16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 TATDN2Q93075 761 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 ATXN7L3BQ96GX2 97 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 CNBD2Q96M20 576 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 DACH2Q96NX9 599 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 C20orf96Q9NUD7 363 aaPredicted RBP16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 NARFQ9UHQ1 456 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 PDE2AO00408 941 aaPredicted RBP16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 ABL1P00519 1130 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 PTENP60484 403 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 IRGCQ6NXR0 463 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 C4orf50Q6ZRC1 276 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 STK32AQ8WU08 396 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 SEMA6BQ9H3T3 888 aa16.58■□□□□ 0.25
RBFOX1-212ENST00000550418 KCNN4O15554 427 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 SLC26A4O43511 780 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 SESN2P58004 480 aaPredicted RBP16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 AGAP11Q8TF27 550 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 GRID1Q9ULK0 1009 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 AKT3Q9Y243 479 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 KRT75O95678 551 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 PON1P27169 355 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 DCAF15Q66K64 600 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 PGM2Q96G03 612 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 C10orf88Q9H8K7 445 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 ATP11BQ9Y2G3 1177 aa16.58■□□□□ 0.24
RBFOX1-212ENST00000550418 PALM3A6NDB9 673 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 PPEF1O14829 653 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 SLC34A1Q06495 639 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 SETD3Q86TU7 594 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 FAM84BQ96KN1 310 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 CLRN2A0PK11 232 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 GH2P01242 217 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 VPS72Q15906 364 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 NTRK3Q16288 839 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 ARMCX2Q7L311 632 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 NSUN4Q96CB9 384 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 MAML3Q96JK9 1138 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 A0A0A6YYK5 440 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 M0QYV0 167 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 FKBP6O75344 327 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 SLC4A1P02730 911 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 MYL2P10916 166 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 TCN1P20061 433 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 CDC25CP30307 473 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 KRT76Q01546 638 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 MEA1Q16626 185 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 TRMT5Q32P41 509 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 TTC39BQ5VTQ0 682 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 CDY2AQ9Y6F7 541 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 CDY1Q9Y6F8 540 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 TRIM49D1C9J1S8 452 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 KRT16P08779 473 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 IFI35P80217 286 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 GRAPQ13588 217 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 CD302Q8IX05 232 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 SHCBP1LQ9BZQ2 653 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 METTL5Q9NRN9 209 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 SEPT3Q9UH03 358 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms