RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	LRRC53	A6NM62	1247 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	TBKBP1	A7MCY6	615 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160		F8VZ95	297 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	PODXL	O00592	558 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	PIR	O00625	290 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	FER	P16591	822 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	SOX5	P35711	763 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	ADK	P55263	362 aa	Known RBP	12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	APBA1	Q02410	837 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	SOX4	Q06945	474 aa	Predicted RBP	12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	DRAP1	Q14919	205 aa	Predicted RBP	12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	SPOPL	Q6IQ16	392 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	GJB7	Q6PEY0	223 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.46	□□□□□ -0.41	1e-6	■■■■■ 46
CNOT2-223	ENST00000550160	TC2N	Q8N9U0	490 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	CXorf38	Q8TB03	319 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	BAP1	Q92560	729 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	SYN2	Q92777	582 aa	Predicted RBP	12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	TATDN2	Q93075	761 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	TOP1MT	Q969P6	601 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	VWCE	Q96DN2	955 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	CASD1	Q96PB1	797 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	DNAJC7	Q99615	494 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	NAA15	Q9BXJ9	866 aa	Known RBP	12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	CYP3A43	Q9HB55	503 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	GOLGA2P5	Q9HBQ8	144 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	MIOS	Q9NXC5	875 aa		12.46	□□□□□ -0.41
CNOT2-223	ENST00000550160	CENPF	P49454	3210 aa		12.46	□□□□□ -0.42
CNOT2-223	ENST00000550160	TET1	Q8NFU7	2136 aa		12.46	□□□□□ -0.42
CNOT2-223	ENST00000550160	TTC3	P53804	2025 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	MICAL3	Q7RTP6	2002 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	ALPK3	Q96L96	1907 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	KPNA7	A9QM74	516 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	LRRN2	O75325	713 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	DGKI	O75912	1065 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	USP8	P40818	1118 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	AFF1	P51825	1210 aa	Known RBP	12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	JAM2	P57087	298 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	DSC1	Q08554	894 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	ARID5B	Q14865	1188 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	NAB2	Q15742	525 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	ASIC2	Q16515	512 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	TMEM240	Q5SV17	173 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	DPY19L2P1	Q6NXN4	242 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	DCLRE1A	Q6PJP8	1040 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	LRRC8A	Q8IWT6	810 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	CRIPAK	Q8N1N5	446 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	SHC3	Q92529	594 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	MMS19	Q96T76	1030 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	SLC9A7	Q96T83	725 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	APOBEC3G	Q9HC16	384 aa	Known RBP	12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	SNX9	Q9Y5X1	595 aa		12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	BZW2	Q9Y6E2	419 aa	Known RBP	12.45	□□□□□ -0.42
CNOT2-223	ENST00000550160	RBAK-RBAKDN	I3L0D1	243 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	TRAPPC3	O43617	180 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	HUS1	O60921	280 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	B3GAT3	O94766	335 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	KRT5	P13647	590 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	HNRNPH3	P31942	346 aa	Known RBP	12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	ASPA	P45381	313 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	OR1G1	P47890	313 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	CLCNKB	P51801	687 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	BPIFB4	P59827	614 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	DEFB103A	P81534	67 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	UPP1	Q16831	310 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	PAN2	Q504Q3	1202 aa	Known RBP	12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	HS1BP3	Q53T59	392 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	TDRD12	Q587J7	1177 aa	Known RBP	12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	CYP26C1	Q6V0L0	522 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	DSTYK	Q6XUX3	929 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	SCARA5	Q6ZMJ2	495 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	DPH6	Q7L8W6	267 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	VPS36	Q86VN1	386 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	CMTR2	Q8IYT2	770 aa	Known RBP	12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	HERVK_113	Q902F9	699 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	KREMEN1	Q96MU8	473 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	YME1L1	Q96TA2	773 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	BAG1	Q99933	345 aa	Predicted RBP	12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.44	□□□□□ -0.42	8e-10	■■□□□ 13.1
CNOT2-223	ENST00000550160	TMEM175	Q9BSA9	504 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	ZBED2	Q9BTP6	218 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	COLEC11	Q9BWP8	271 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	BCO2	Q9BYV7	579 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	GDAP2	Q9NXN4	497 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	AIPL1	Q9NZN9	384 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	PCDHB4	Q9Y5E5	795 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	SLC4A7	Q9Y6M7	1214 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	PDCD11	Q14690	1871 aa	Known RBP	12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	LTBP2	Q14767	1821 aa		12.44	□□□□□ -0.42
CNOT2-223	ENST00000550160	TMEM189-UBE2V1	I3L0A0	370 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	RNF225	M0QZC1	329 aa	Predicted RBP	12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	PPEF2	O14830	753 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	GFPT2	O94808	682 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	ALDH2	P05091	517 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	SERPING1	P05155	500 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	FAM163B	P0C2L3	166 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	ALDH7A1	P49419	539 aa	Known RBP	12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	GATM	P50440	423 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	PDE6C	P51160	858 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	LILRA4	P59901	499 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms