RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 FAM84AQ96KN4 292 aa20.89■□□□□ 0.93
DDX54-207ENST00000550016 ZNF560Q96MR9 790 aa20.89■□□□□ 0.93
DDX54-207ENST00000550016 SIX4Q9UIU6 781 aa20.89■□□□□ 0.93
DDX54-207ENST00000550016 SPTLC1O15269 473 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 KRT19P08727 400 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 SRGAP2BP0DMP2 458 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 KCNA5P22460 613 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 NDUFV1P49821 464 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 SV2CQ496J9 727 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 VARS2Q5ST30 1063 aaKnown RBP20.88■□□□□ 0.93
DDX54-207ENST00000550016 LLGL2Q6P1M3 1020 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 TRAPPC11Q7Z392 1133 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 LRRC52Q8N7C0 313 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 NELFBQ8WX92 580 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 SENP8Q96LD8 212 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 CLSTN3Q9BQT9 956 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 MKNK1Q9BUB5 465 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 MTRRQ9UBK8 725 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 R3HCC1Q9Y3T6 440 aaKnown RBP20.88■□□□□ 0.93
DDX54-207ENST00000550016 BACE2Q9Y5Z0 518 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 HCFC2Q9Y5Z7 792 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 TSC2P49815 1807 aa20.88■□□□□ 0.93
DDX54-207ENST00000550016 BICDL2A1A5D9 508 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 ARHGEF37A1IGU5 675 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 TRIM49BA6NDI0 452 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 LRRIQ3A6PVS8 624 aaPredicted RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 H7C4K7 107 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 C1RP00736 705 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 KRT13P13646 458 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 RPL17P18621 184 aaKnown RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 CLCN4P51793 760 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 VAMP7P51809 220 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 AP3M2P53677 418 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 RBM10P98175 930 aaKnown RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 ENPEPQ07075 957 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 DLX2Q07687 328 aaPredicted RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 MRPL58Q14197 206 aaKnown RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 AAK1Q2M2I8 961 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 FOXR2Q6PJQ5 311 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 INTS8Q75QN2 995 aaKnown RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 USP37Q86T82 979 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 ZC3H3Q8IXZ2 948 aaKnown RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 ATXN2LQ8WWM7 1075 aaKnown RBP20.87■□□□□ 0.93
DDX54-207ENST00000550016 CASP10Q92851 521 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 EEF2KMTQ96G04 330 aa20.87■□□□□ 0.93
DDX54-207ENST00000550016 KPNA7A9QM74 516 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 IKBKBO14920 756 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 TBX10O75333 385 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 ODC1P11926 461 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 TYMPP19971 482 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 DLG4P78352 724 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 TFF2Q03403 129 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 SCARA3Q6AZY7 606 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 TTI2Q6NXR4 508 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 GLYCTKQ8IVS8 523 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 MLKLQ8NB16 471 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 BORCS6Q96GS4 357 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 CLEC1BQ9P126 229 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 BARX2Q9UMQ3 279 aaPredicted RBP20.86■□□□□ 0.93
DDX54-207ENST00000550016 CTNND2Q9UQB3 1225 aa20.86■□□□□ 0.93
DDX54-207ENST00000550016 TCF20Q9UGU0 1960 aaKnown RBP20.86■□□□□ 0.93
DDX54-207ENST00000550016 H3BQ06 376 aaPredicted RBP20.85■□□□□ 0.93
DDX54-207ENST00000550016 CYB561D2O14569 222 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 OAZ2O95190 189 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 EPB41P11171 864 aaKnown RBP20.85■□□□□ 0.93
DDX54-207ENST00000550016 EPCAMP16422 314 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 MCCD1P59942 119 aaPredicted RBP20.85■□□□□ 0.93
DDX54-207ENST00000550016 MRPS5P82675 430 aaKnown RBP20.85■□□□□ 0.93
DDX54-207ENST00000550016 BFSP1Q12934 665 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 MYO1EQ12965 1108 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 PAK1Q13153 545 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 LEXMQ3ZCV2 418 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 PALB2Q86YC2 1186 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDX54-207ENST00000550016 MSLNLQ96KJ4 702 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 DUSP9Q99956 384 aaKnown RBP20.85■□□□□ 0.93
DDX54-207ENST00000550016 DSEQ9UL01 958 aa20.85■□□□□ 0.93
DDX54-207ENST00000550016 TIMM13Q9Y5L4 95 aaPredicted RBP20.85■□□□□ 0.93
DDX54-207ENST00000550016 SLC16A3O15427 465 aaKnown RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 ADAM12O43184 909 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 TBC1D4O60343 1298 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 PHACTR2O75167 634 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 GLUD1P00367 558 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 CST3P01034 146 aaPredicted RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 C4BPAP04003 597 aaKnown RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 CYP11A1P05108 521 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 HOXB8P17481 243 aaPredicted RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 OR1D2P34982 312 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 YWHAHQ04917 246 aaPredicted RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 RAB33AQ14088 237 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 CTXN3Q4LDR2 81 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 C1orf220Q5T0J3 134 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 ZNF280DQ6N043 979 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 ANKRD54Q6NXT1 300 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 LILRA6Q6PI73 481 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 RSPO2Q6UXX9 243 aaPredicted RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 HPDLQ96IR7 371 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 CEP63Q96MT8 703 aa20.84■□□□□ 0.93
DDX54-207ENST00000550016 OXCT2Q9BYC2 517 aaPredicted RBP20.84■□□□□ 0.93
DDX54-207ENST00000550016 DZANK1Q9NVP4 752 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms