RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MAN2B1O00754 1011 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 TDGF1P13385 188 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 PSMC3P17980 439 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 MARCKSP29966 332 aaPredicted RBP16.8■□□□□ 0.28
RAB5C-205ENST00000550013 EPHA5P54756 1037 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
RAB5C-205ENST00000550013 MCL1Q07820 350 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 TEAD2Q15562 447 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 ZPBP2Q6X784 338 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 SHKBP1Q8TBC3 707 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 ZSCAN18Q8TBC5 510 aaPredicted RBP16.8■□□□□ 0.28
RAB5C-205ENST00000550013 FAM3CQ92520 227 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 IRF7Q92985 503 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 KIF2CQ99661 725 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 CHRDQ9H2X0 955 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 CRISPLD1Q9H336 500 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 ASAH2Q9NR71 780 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 PIAS3Q9Y6X2 628 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 M0QZQ0 153 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 CLDN3O15551 220 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 TNFSF9P41273 254 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 MATR3P43243 847 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB5C-205ENST00000550013 GUCY2FP51841 1108 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 SMTNP53814 917 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 HYIQ5T013 277 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 SYT2Q8N9I0 419 aaPredicted RBP16.79■□□□□ 0.28
RAB5C-205ENST00000550013 BEST2Q8NFU1 509 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 RSPRY1Q96DX4 576 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 KIF12Q96FN5 646 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 PGLYRP2Q96PD5 576 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 LMAN1LQ9HAT1 526 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 MAFFQ9ULX9 164 aa16.79■□□□□ 0.28
RAB5C-205ENST00000550013 TTC26A0AVF1 554 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 HEPACAM2A8MVW5 462 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 OAZ2O95190 189 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 CLTAP09496 248 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 LRPAP1P30533 357 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 YWHAHQ04917 246 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-205ENST00000550013 ZBTB6Q15916 424 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 GPIHBP1Q8IV16 184 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 LEMD2Q8NC56 503 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 DEPDC1BQ8WUY9 529 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 BICD1Q96G01 975 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 LRRC3Q9BY71 257 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 DNAJC25Q9H1X3 360 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 SLITRK6Q9H5Y7 841 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 TRPV4Q9HBA0 871 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 TRPV5Q9NQA5 729 aa16.78■□□□□ 0.28
RAB5C-205ENST00000550013 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 LACTBL1A8MY62 500 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 ARNTLO00327 626 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 ZNF263O14978 683 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 PLA2G4BP0C869 781 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 AARSP49588 968 aaKnown RBP eCLIP16.77■□□□□ 0.28
RAB5C-205ENST00000550013 ATP2C1P98194 919 aaPredicted RBP16.77■□□□□ 0.28
RAB5C-205ENST00000550013 DUSP4Q13115 394 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 ARSHQ5FYA8 562 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 STXBP5Q5T5C0 1151 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 MCTP1Q6DN14 999 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 TMC8Q8IU68 726 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 SECISBP2LQ93073 1101 aaKnown RBP16.77■□□□□ 0.28
RAB5C-205ENST00000550013 FAM126AQ9BYI3 521 aaPredicted RBP16.77■□□□□ 0.28
RAB5C-205ENST00000550013 PARD6AQ9NPB6 346 aa16.77■□□□□ 0.28
RAB5C-205ENST00000550013 TSC2P49815 1807 aa16.77■□□□□ 0.27
RAB5C-205ENST00000550013 TPRP12270 2363 aaKnown RBP16.77■□□□□ 0.27
RAB5C-205ENST00000550013 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 PPEF2O14830 753 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 TGM1P22735 817 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 CCNE1P24864 410 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 NCKAP1LP55160 1127 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 PPP2R3AQ06190 1150 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 GAS6Q14393 721 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 ENOX2Q16206 610 aaKnown RBP16.76■□□□□ 0.27
RAB5C-205ENST00000550013 LPAL2Q16609 132 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 TTC9BQ8N6N2 239 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 GPR161Q8N6U8 529 aaKnown RBP16.76■□□□□ 0.27
RAB5C-205ENST00000550013 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 USP18Q9UMW8 372 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 UBQLN1Q9UMX0 589 aaKnown RBP16.76■□□□□ 0.27
RAB5C-205ENST00000550013 SLC27A5Q9Y2P5 690 aa16.76■□□□□ 0.27
RAB5C-205ENST00000550013 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
RAB5C-205ENST00000550013 KIF26AQ9ULI4 1882 aaPredicted RBP16.76■□□□□ 0.27
RAB5C-205ENST00000550013 OR6C75A6NL08 312 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 FAM189A1O60320 539 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 SOAT2O75908 522 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 CHRNB1P11230 501 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 CYP3A5P20815 502 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 SOX9P48436 509 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 CCR3P51677 355 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 ATXN1P54253 815 aaKnown RBP16.75■□□□□ 0.27
RAB5C-205ENST00000550013 EPHB3P54753 998 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 SATB1Q01826 763 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 GPR17Q13304 367 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 PLD1Q13393 1074 aa16.75■□□□□ 0.27
RAB5C-205ENST00000550013 TMEM119Q4V9L6 283 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms