RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 POLIQ9UNA4 740 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 SMG5Q9UPR3 1016 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 CHD2O14647 1828 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 EEF2KO00418 725 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 FGRP09769 529 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 TRIM49P0CI25 452 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 TRIM49CP0CI26 452 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 HDAC4P56524 1084 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 NLRP11P59045 1033 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 ENPEPQ07075 957 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 MYBP10242 640 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 PDGFRAP16234 1089 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 STIP1P31948 543 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 PRAMEP78395 509 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 GFPT1Q06210 699 aaPredicted RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 AARS2Q5JTZ9 985 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 GAS2L3Q86XJ1 694 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 ASCC2Q9H1I8 757 aaPredicted RBP9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 FBXO44Q9H4M3 255 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 ZDHHC9Q9Y397 364 aa9.73□□□□□ -0.85
PPFIA2-216ENST00000549396 SHPRHQ149N8 1683 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NEMP1O14524 444 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 RTN3O95197 1032 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 THPOP40225 353 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NAPEPLDQ6IQ20 393 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ACAD10Q6JQN1 1059 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 FEZF2Q8TBJ5 459 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 LRRC37BQ96QE4 947 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NAT9Q9BTE0 207 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 VIPAS39Q9H9C1 493 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NRCAMQ92823 1304 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ENC1O14682 589 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 CYP26A1O43174 497 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 THP07101 528 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 PAEPP09466 180 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 FNTAP49354 379 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 PMS2P54278 862 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 CYP4A22Q5TCH4 519 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 SLC27A1Q6PCB7 646 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 MRPS31Q92665 395 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 TBCBQ99426 244 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 XAB2Q9HCS7 855 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NRBP1Q9UHY1 535 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 TRAF3IP3Q9Y228 551 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 RENBPP51606 427 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 EIF3EP60228 445 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 MFSD10Q14728 455 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NBPF9Q3BBW0 867 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 UGT3A1Q6NUS8 523 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 RBM43Q6ZSC3 357 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 REPS2Q8NFH8 660 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ENGASEQ8NFI3 743 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ZNF507Q8TCN5 953 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ROPN1BQ9BZX4 212 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ROPN1Q9HAT0 212 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 APOBEC2Q9Y235 224 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NR2E3Q9Y5X4 410 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 MRFAP1Q9Y605 127 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 AHDC1Q5TGY3 1603 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 CREB3O43889 395 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 FGF19O95750 216 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 PSEN2P49810 448 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 CDR2Q01850 454 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 PTK6Q13882 451 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 NTRK3Q16288 839 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ZNF394Q53GI3 561 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 RGMBQ6NW40 437 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 ADAT2Q7Z6V5 191 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 GLYCTKQ8IVS8 523 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 MFN1Q8IWA4 741 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 TRIM59Q8IWR1 403 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 GJB4Q9NTQ9 266 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 SLC13A4Q9UKG4 626 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 SLC45A1Q9Y2W3 748 aa9.72□□□□□ -0.85
PPFIA2-216ENST00000549396 E5RI56 91 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 H3BRB1 525 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 PYGLP06737 847 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 PRLRP16471 622 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 EPHB3P54753 998 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 GEMP55040 296 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 SMARCB1Q12824 385 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 GIT2Q14161 759 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 GRIK4Q16099 956 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 DCAF6Q58WW2 860 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 UNC45BQ8IWX7 931 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 MTBPQ96DY7 904 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 CYTH2Q99418 400 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 TEX12Q9BXU0 123 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 TRIM55Q9BYV6 548 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 UPF3AQ9H1J1 476 aaKnown RBP9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 TMEM60Q9H2L4 133 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 LTBP3Q9NS15 1303 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 TRIM67Q6ZTA4 783 aa9.71□□□□□ -0.85
PPFIA2-216ENST00000549396 C1orf131Q8NDD1 294 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms