RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ARID3BQ8IVW6 561 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 MCPH1Q8NEM0 835 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 SHKBP1Q8TBC3 707 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 CCDC113Q9H0I3 377 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 TTC12Q9H892 705 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 VPS45Q9NRW7 570 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 GJB4Q9NTQ9 266 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 PCDHGA5Q9Y5G8 931 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 SRRM3A6NNA2 597 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 C4orf47A7E2U8 309 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 SYN3O14994 580 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 TOP3BO95985 862 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 PSMA5P28066 241 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 OSTNP61366 133 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 STXBP5Q5T5C0 1151 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 PKN3Q6P5Z2 889 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 HAUS6Q7Z4H7 955 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 SKAP1Q86WV1 359 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 DEPTORQ8TB45 409 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 ZC3H10Q96K80 434 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 EDEM2Q9BV94 578 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 SLC8A2Q9UPR5 921 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 WASF3Q9UPY6 502 aa11.85□□□□□ -0.51
TRAFD1-206ENST00000549358 CCDC163A0A0D9SF12 145 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 DPYSL4O14531 572 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 DTNBO60941 627 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 CDC45O75419 566 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 CPB1P15086 417 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 YARSP54577 528 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 TNK2Q07912 1038 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 ZNF252P-AS1Q0IIN9 211 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 CALCRLQ16602 461 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 SH3PXD2AQ5TCZ1 1133 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 NT5DC1Q5TFE4 455 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 ATF7IP2Q5U623 682 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 LRSAM1Q6UWE0 723 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 CEP120Q8N960 986 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 KIFC3Q9BVG8 833 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 LRRC3Q9BY71 257 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 POLD4Q9HCU8 107 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 MAFFQ9ULX9 164 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
TRAFD1-206ENST00000549358 LAMA1P25391 3075 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 TMEM8BA6NDV4 472 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 ATG13O75143 517 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 AKAP3O75969 853 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 SPATA31C1P0DKV0 1188 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 XBP1P17861 261 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 NAMPTP43490 491 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 CREB5Q02930 508 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 RING1Q06587 406 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 PLK5Q496M5 336 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 XKR4Q5GH76 650 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 DAB2IPQ5VWQ8 1189 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 ZNF280DQ6N043 979 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 ALKAL1Q6UXT8 129 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 APBB1IPQ7Z5R6 666 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 CATSPER3Q86XQ3 398 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 DDX12PQ92771 950 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 C18orf25Q96B23 403 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 CCDC94Q9BW85 323 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 SCNM1Q9BWG6 230 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 DUSP15Q9H1R2 295 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 POLR3BQ9NW08 1133 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 YIPF1Q9Y548 306 aa11.83□□□□□ -0.52
TRAFD1-206ENST00000549358 RALGAPA1Q6GYQ0 2036 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 SOBPA7XYQ1 873 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 DCLK1O15075 740 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 CAVIN2O95810 425 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 CYP11B2P19099 503 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 MARCKSP29966 332 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 RPL9P32969 192 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 MCM4P33991 863 aa11.82□□□□□ -0.52
TRAFD1-206ENST00000549358 GRM5P41594 1212 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms