RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 FAM83CQ9BQN1 747 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
TROAP-209ENST00000549275 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 CYP4F11Q9HBI6 524 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 STARD5Q9NSY2 213 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
TROAP-209ENST00000549275 MAFFQ9ULX9 164 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 ZFHX3Q15911 3703 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 KNTC1P50748 2209 aa11.7□□□□□ -0.54
TROAP-209ENST00000549275 NEDD4P46934 1319 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 ADAMTS9Q9P2N4 1935 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 BLACEA4D250 179 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 MEIS1O00470 390 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 KIF4AO95239 1232 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 OATP04181 439 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 SREBF1P36956 1147 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 HAND2P61296 217 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 ROR1Q01973 937 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 RPL6Q02878 288 aaKnown RBP11.69□□□□□ -0.54
TROAP-209ENST00000549275 GRIK2Q13002 908 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 PSMD2Q13200 908 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 TUSC3Q13454 348 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 DRP2Q13474 957 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 SUZ12Q15022 739 aaKnown RBP11.69□□□□□ -0.54
TROAP-209ENST00000549275 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
TROAP-209ENST00000549275 HASPINQ8TF76 798 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 RABGGTAQ92696 567 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 TM7SF3Q9NS93 570 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 GABBR1Q9UBS5 961 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 MMP17Q9ULZ9 603 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 TBX20Q9UMR3 447 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 PCDHA6Q9UN73 950 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 PCDHA8Q9Y5H6 950 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 PCDHA10Q9Y5I2 948 aa11.69□□□□□ -0.54
TROAP-209ENST00000549275 GON4LQ3T8J9 2241 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 POLQO75417 2590 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 CER1O95813 267 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 KRT10P13645 584 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 TPGS2Q68CL5 300 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 NIPA1Q7RTP0 329 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 RHPN2Q8IUC4 686 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
TROAP-209ENST00000549275 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 USP33Q8TEY7 942 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 IFT122Q9HBG6 1241 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 CEP72Q9P209 647 aa11.68□□□□□ -0.54
TROAP-209ENST00000549275 SUCLA2Q9P2R7 463 aaPredicted RBP11.68□□□□□ -0.54
TROAP-209ENST00000549275 ITPR2Q14571 2701 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 A0A1W2PRU2 124 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 DHX15O43143 795 aaKnown RBP11.67□□□□□ -0.54
TROAP-209ENST00000549275 BRINP1O60477 761 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 AXLP30530 894 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
TROAP-209ENST00000549275 PCBP1Q15365 356 aaKnown RBP eCLIP11.67□□□□□ -0.54
TROAP-209ENST00000549275 TARBP2Q15633 366 aaKnown RBP11.67□□□□□ -0.54
TROAP-209ENST00000549275 IL27RAQ6UWB1 636 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 TICAM1Q8IUC6 712 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 FRMD1Q8N878 549 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 EZH1Q92800 747 aaPredicted RBP11.67□□□□□ -0.54
TROAP-209ENST00000549275 CD101Q93033 1021 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 NLRP4Q96MN2 994 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 PAAF1Q9BRP4 392 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
TROAP-209ENST00000549275 PLEKHB1Q9UF11 243 aaPredicted RBP11.67□□□□□ -0.54
TROAP-209ENST00000549275 OTOL1A6NHN0 477 aaPredicted RBP11.66□□□□□ -0.54
TROAP-209ENST00000549275 FGF19O95750 216 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 SFTPCP11686 197 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 TNFRSF8P28908 595 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 TLE1Q04724 770 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 TWF1Q12792 350 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 MYO1EQ12965 1108 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 TTC30AQ86WT1 665 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 TSC1Q92574 1164 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 UBAC1Q9BSL1 405 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 ZNF768Q9H5H4 540 aaKnown RBP11.66□□□□□ -0.54
TROAP-209ENST00000549275 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 BCCIPQ9P287 314 aaKnown RBP eCLIP11.66□□□□□ -0.54
TROAP-209ENST00000549275 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
TROAP-209ENST00000549275 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.54
TROAP-209ENST00000549275 ESYT2A0FGR8 921 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 TMEM189-UBE2V1I3L0A0 370 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 SEC24AO95486 1093 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 NDUFV2P19404 249 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 GJA4P35212 333 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.54
TROAP-209ENST00000549275 TARDBPQ13148 414 aaKnown RBP eCLIP11.65□□□□□ -0.54
TROAP-209ENST00000549275 HSF5Q4G112 596 aaPredicted RBP11.65□□□□□ -0.54
TROAP-209ENST00000549275 ARHGAP15Q53QZ3 475 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 SYCP2LQ5T4T6 812 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms