RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 UNC13DQ70J99 1090 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 FSIP1Q8NA03 581 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 NELL1Q92832 810 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 HAPLN2Q9GZV7 340 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 TOPORSQ9NS56 1045 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 ANKFY1Q9P2R3 1169 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 EXOC7Q9UPT5 735 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 MTF2Q9Y483 593 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 NOTCH4Q99466 2003 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 PTGESO14684 152 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 NR1I2O75469 434 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 GCNT3O95395 438 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 MYL1P05976 194 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 MATR3P43243 847 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 EHHADHQ08426 723 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 CUL4BQ13620 913 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 KYAT1Q16773 422 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 L1TD1Q5T7N2 865 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 SLFN12LQ6IEE8 588 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 SLC39A4Q6P5W5 647 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 ZBTB44Q8NCP5 570 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 ACCSQ96QU6 501 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 OSBPL6Q9BZF3 934 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 CDH7Q9ULB5 785 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 PCDHGA2Q9Y5H1 932 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
CHMP1A-206ENST00000549139 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 A0A0B4J269 797 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 LILRB5O75023 590 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 ZNF202O95125 648 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 RPL17P18621 184 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 TGM1P22735 817 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 FSHRP23945 695 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 CASP1P29466 404 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 CASP5P51878 434 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 OSTNP61366 133 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 PRKCQQ04759 706 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 TUSC3Q13454 348 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 POSTNQ15063 836 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 NAB2Q15742 525 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 FUT10Q6P4F1 479 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 GPR161Q8N6U8 529 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 COLEC11Q9BWP8 271 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 GOLPH3LQ9H4A5 285 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 TMEM206Q9H813 350 aa17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 SPATA6Q9NWH7 488 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-206ENST00000549139 SMIM28A0A1B0GU29 152 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 OGTO15294 1046 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 LAMTOR5O43504 91 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 CLTAP09496 248 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 SDHBP21912 280 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 NTHL1P78549 312 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 KCNA1Q09470 495 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 MLF2Q15773 248 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 USP41Q3LFD5 358 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 KRBA2Q6ZNG9 492 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 GRASPQ7Z6J2 395 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 FGFBP2Q9BYJ0 223 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 EPC1Q9H2F5 836 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 PLEKHA5Q9HAU0 1116 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 NCDNQ9UBB6 729 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
CHMP1A-206ENST00000549139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 FAM170BA6NMN3 283 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 EIF3DO15371 548 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 KLRC4O43908 158 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 FAM189A1O60320 539 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 PRPF6O94906 941 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 KCNE1P15382 129 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 CSTF1Q05048 431 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 SEZ6Q53EL9 994 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 FAM26FQ5R3K3 315 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 RSPO2Q6UXX9 243 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 ZNF507Q8TCN5 953 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 FGF13Q92913 245 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 CLDN23Q96B33 292 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 MSTO1Q9BUK6 570 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 LTB4R2Q9NPC1 389 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 CNTN3Q9P232 1028 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 ADAM28Q9UKQ2 775 aa17.08■□□□□ 0.32
CHMP1A-206ENST00000549139 PRR5-ARHGAP8B1AHC4 643 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 ADRB2P07550 413 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms