RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 EEF1DP3Q658K8 133 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 PPP4R3AQ6IN85 833 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 KRT25Q7Z3Z0 450 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 TMC8Q8IU68 726 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 ARID3BQ8IVW6 561 aaPredicted RBP10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 ZBTB8OSQ8IWT0 167 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 CCDC43Q96MW1 224 aaKnown RBP10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 TMEM209Q96SK2 561 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 LRRC3Q9BY71 257 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 POLR3BQ9NW08 1133 aaPredicted RBP10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 AFF4Q9UHB7 1163 aaKnown RBP10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 USP20Q9Y2K6 914 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
NCKAP1L-206ENST00000548980 ATG2BQ96BY7 2078 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 MAST4O15021 2626 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 PODXLO00592 558 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 DPYSL4O14531 572 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 LYPLA2O95372 231 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 GCFC2P16383 781 aaKnown RBP10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 MRPL58Q14197 206 aaKnown RBP10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 ITPRIPL2Q3MIP1 535 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 DCAF4L1Q3SXM0 396 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 TMEM196Q5HYL7 178 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 FSTL4Q6MZW2 842 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 NEK8Q86SG6 692 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 PDZD3Q86UT5 571 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 PROSER1Q86XN7 944 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 MKNK1Q9BUB5 465 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 ANKEF1Q9NU02 776 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 OBP2AQ9NY56 170 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 MAFFQ9ULX9 164 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 GPSM3Q9Y4H4 160 aa10.64□□□□□ -0.71
NCKAP1L-206ENST00000548980 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 PATE3B3GLJ2 98 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 KHNYNO15037 678 aaKnown RBP10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 MARCH6O60337 910 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 CCNT1O60563 726 aaKnown RBP10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 RNF40O75150 1001 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 PRAMEF12O95522 483 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 CPB1P15086 417 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 LIG1P18858 919 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 GBP1P32455 592 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 GRSF1Q12849 480 aaKnown RBP eCLIP10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 MAPK6Q16659 721 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 UAP1L1Q3KQV9 507 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 PMS2CLQ68D20 193 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 C19orf48Q6RUI8 117 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 RNF19BQ6ZMZ0 732 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 MAEAQ7L5Y9 396 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 TRIM22Q8IYM9 498 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 BPIFB1Q8TDL5 484 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 HSD17B14Q9BPX1 270 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 EIF2AK1Q9BQI3 630 aaKnown RBP10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 CCDC113Q9H0I3 377 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 DNAJC25Q9H1X3 360 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 C2orf40Q9H1Z8 148 aa10.63□□□□□ -0.71
NCKAP1L-206ENST00000548980 CCDC194A0A1B0GVG4 234 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 ACKR2O00590 384 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 VNN2O95498 520 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 EGFP01133 1207 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 MCM2P49736 904 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 CCT2P78371 535 aaKnown RBP10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 PLD1Q13393 1074 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 CYP2U1Q7Z449 544 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 ABCA7Q8IZY2 2146 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 BEST2Q8NFU1 509 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 PIGOQ8TEQ8 1089 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 BSNDQ8WZ55 320 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 CHFRQ96EP1 664 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 AIFM3Q96NN9 605 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 ATXN3LQ9H3M9 355 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
NCKAP1L-206ENST00000548980 PCNX2A6NKB5 2137 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 A0A087WWV3 80 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 SPAARA0A1B0GVQ0 90 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 TRDMT1O14717 391 aaKnown RBP10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 DEXIO95424 95 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 APBB3O95704 486 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 CAPNS1P04632 268 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 MCM4P33991 863 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 IRX4P78413 519 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 SSRP1Q08945 709 aaKnown RBP10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 PTPAQ15257 358 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 COL28A1Q2UY09 1125 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 XKR4Q5GH76 650 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 GPR158Q5T848 1215 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 GAREM2Q75VX8 874 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 SLFN12Q8IYM2 578 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 FAM177A1Q8N128 213 aaPredicted RBP10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 CEP120Q8N960 986 aa10.61□□□□□ -0.71
NCKAP1L-206ENST00000548980 MCPH1Q8NEM0 835 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms