RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RPA3P35244 121 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 ATP11AP98196 1134 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 VSIG1Q86XK7 387 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 GPD1LQ8N335 351 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZCCHC9Q8N567 271 aaKnown RBP14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 TBC1D22BQ9NU19 505 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZNF70Q9UC06 446 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 NKX1-2Q9UD57 310 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 PTPRJQ12913 1337 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 CYP1A1P04798 512 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 KRT15P19012 456 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 TNNI1P19237 187 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 RPS6P62753 249 aaKnown RBP14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 SP4Q02446 784 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 SCARA3Q6AZY7 606 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 FBF1Q8TES7 1133 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 CEP170P1Q96L14 293 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 FAM81BQ96LP2 452 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZNF341Q9BYN7 854 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZNF148Q9UQR1 794 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
RAPGEF3-218ENST00000548919 UTRNP46939 3433 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 TLR3O15455 904 aaKnown RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 PECAM1P16284 738 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ATP2A2P16615 1042 aaKnown RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ACOT2P49753 483 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 MCCD1P59942 119 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 RPL7AP62424 266 aaKnown RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ACVR2BQ13705 512 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 PGM5Q15124 567 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 TMEM270Q6UE05 265 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 MAB21L3Q8N8X9 362 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 TRABDQ9H4I3 376 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 SLC5A4Q9NY91 659 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 A0A1W2PPM1 405 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 WDR64B1ANS9 1081 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 GOLGA8SH3BPF8 625 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 GOLGA8MH3BSY2 632 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 PSTPIP1O43586 416 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 NEBLO76041 1014 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 HLA-DRAP01903 254 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 MYBL1P10243 752 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 PSMC4P43686 418 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ARSEP51690 589 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ANKRD20A2Q5SQ80 823 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ANKRD20A1Q5TYW2 823 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 MEX3CQ5U5Q3 659 aaKnown RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ANKRD20A3Q5VUR7 823 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 TDRD10Q5VZ19 366 aaKnown RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZNF449Q6P9G9 518 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 TAS1R3Q7RTX0 852 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 KATNAL2Q8IYT4 538 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 FAM151AQ8WW52 585 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 FAXDC2Q96IV6 333 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 KIAA1683Q9H0B3 1180 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 VPS37BQ9H9H4 285 aa14.97□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZNF862O60290 1169 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 PLA2G6O60733 806 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 RAD17O75943 681 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 FGFR1P11362 822 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 GTF2H1P32780 548 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 PIK3CAP42336 1068 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 SLC8A3P57103 927 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 NFX1Q12986 1120 aaKnown RBP14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 GPS1Q13098 491 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 MTM1Q13496 603 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 SLC1A5Q15758 541 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 BBOF1Q8ND07 529 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 DENND1AQ8TEH3 1009 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 TIPINQ9BVW5 301 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 DEFB129Q9H1M3 183 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZBTB12Q9Y330 459 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 ACTL7BQ9Y614 415 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 LIASO43766 372 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 NOMO3P69849 1222 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 NOP14P78316 857 aaKnown RBP14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 PTP4A2Q12974 167 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 WDR44Q5JSH3 913 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 LIN9Q5TKA1 542 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 C15orf39Q6ZRI6 1047 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 ENOSF1Q7L5Y1 443 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 RELL1Q8IUW5 271 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 ZBED8Q8IZ13 594 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 GRAMD1AQ96CP6 724 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 TRIM11Q96F44 468 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 CFAP57Q96MR6 1250 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 LRRC37BQ96QE4 947 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 APOBEC3GQ9HC16 384 aaKnown RBP14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 GABBR1Q9UBS5 961 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 PCDHB4Q9Y5E5 795 aa14.96□□□□□ -0.01
RAPGEF3-218ENST00000548919 CBX6O95503 412 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 ACO1P21399 889 aaKnown RBP14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 CA4P22748 312 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 GNA15P30679 374 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 NLRP11P59045 1033 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms