RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 EDF1O60869 148 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 PTGER2P43116 358 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 RASSF2P50749 326 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 CLDN10P78369 228 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 ADCY1Q08828 1119 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 DNAJC3Q13217 504 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 CYP4F22Q6NT55 531 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 SAMD3Q8N6K7 520 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 CLEC4DQ8WXI8 215 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 ERP27Q96DN0 273 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 AGBL1Q96MI9 1066 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 SMC6Q96SB8 1091 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 PI4K2AQ9BTU6 479 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 TRABDQ9H4I3 376 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 KIAA1586Q9HCI6 787 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 FBXO28Q9NVF7 368 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 TMOD2Q9NZR1 351 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 RPL26L1Q9UNX3 145 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 SCINQ9Y6U3 715 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 LIASO43766 372 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 CALCAP01258 141 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 GNAZP19086 355 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 CAP2P40123 477 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 KRT76Q01546 638 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 MAMLD1Q13495 774 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 MORF4L2Q15014 288 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 TBC1D10BQ4KMP7 808 aaPredicted RBP10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 BRDTQ58F21 947 aaPredicted RBP10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 WDR44Q5JSH3 913 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 PLA2G4FQ68DD2 849 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 PHF13Q86YI8 300 aaPredicted RBP10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 RCOR2Q8IZ40 523 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 LRRC8CQ8TDW0 803 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 FAM151AQ8WW52 585 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 RBM41Q96IZ5 413 aaKnown RBP10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 PAIP2Q9BPZ3 127 aaKnown RBP10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 KIFC3Q9BVG8 833 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 RNPEPL1Q9HAU8 725 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 SSU72Q9NP77 194 aaKnown RBP10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 SAYSD1Q9NPB0 183 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 SLC24A2Q9UI40 661 aa10.46□□□□□ -0.74
SMARCD1-205ENST00000548573 NFIBO00712 420 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TRAFD1O14545 582 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 HGSO14964 777 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ALOX15BO15296 676 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 SPAG7O75391 227 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 SMNDC1O75940 238 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CALB2P22676 271 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 NOMO3P69849 1222 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 NFX1Q12986 1120 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 EAPPQ56P03 285 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CMPK2Q5EBM0 449 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 DAB2IPQ5VWQ8 1189 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 LLGL2Q6P1M3 1020 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 PHLDB2Q86SQ0 1253 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 PRUNE1Q86TP1 453 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ABRAQ8N0Z2 381 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TEX9Q8N6V9 391 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 RDM1Q8NG50 284 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ZNF398Q8TD17 642 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ELMO3Q96BJ8 720 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 FAM118BQ9BPY3 351 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CYP39A1Q9NYL5 469 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 FETUBQ9UGM5 382 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 DRG1Q9Y295 367 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 LRRC42Q9Y546 428 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TCP10L2B9ZVM9 353 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 HNRNPDLO14979 420 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TLR3O15455 904 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TYROBPO43914 113 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TBC1D12O60347 775 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 HNRNPCL1O60812 293 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 PEX11AO75192 247 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 NEBLO76041 1014 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 TJP3O95049 919 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 KRT15P19012 456 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CD58P19256 250 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ACO1P21399 889 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 DSG3P32926 999 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ABCD1P33897 745 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 RTP1P59025 263 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 MCL1Q07820 350 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 BLMHQ13867 455 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ZYXQ15942 572 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 PKN2Q16513 984 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ZACNQ401N2 412 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ZC3H12AQ5D1E8 599 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 WASHC2DQ5SRD0 308 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ANO5Q75V66 913 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ALLCQ8N6M5 410 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ENDOVQ8N8Q3 282 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 FEZF2Q8TBJ5 459 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms