RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 GAS8O95995 478 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 RALAP11233 206 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 CCDC25Q86WR0 208 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 KATNAL2Q8IYT4 538 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 RAPGEF5Q92565 580 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 SNF8Q96H20 258 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 ACO2Q99798 780 aaKnown RBP16.5■□□□□ 0.23
BRF1-212ENST00000547562 PARVAQ9NVD7 372 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 R3HDM2Q9Y2K5 976 aaKnown RBP16.5■□□□□ 0.23
BRF1-212ENST00000547562 MCM3APO60318 1980 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 ARIH2O95376 493 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 IVDP26440 423 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 IRX3P78415 501 aaPredicted RBP16.5■□□□□ 0.23
BRF1-212ENST00000547562 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 ZNF568Q3ZCX4 644 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 MICALCLQ6ZW33 695 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 TRMT10CQ7L0Y3 403 aaKnown RBP16.5■□□□□ 0.23
BRF1-212ENST00000547562 TADA2BQ86TJ2 420 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 ATL2Q8NHH9 583 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 TCP11Q8WWU5 503 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 MTMR12Q9C0I1 747 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 AAASQ9NRG9 546 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 HOMER3Q9NSC5 361 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 MGAMO43451 1857 aa16.5■□□□□ 0.23
BRF1-212ENST00000547562 SMIM23A6NLE4 172 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 OGTO15294 1046 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 GAS2O43903 313 aaKnown RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 SRGAP2CP0DJJ0 459 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 MMP8P22894 467 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 MARK3P27448 753 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 MXD4Q14582 209 aaPredicted RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 UHMK1Q8TAS1 419 aaKnown RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 FEZF2Q8TBJ5 459 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 EPS8L3Q8TE67 593 aaKnown RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 GPR20Q99678 358 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 HEMGNQ9BXL5 484 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 R3HDMLQ9H3Y0 253 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 GGA2Q9UJY4 613 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 ANK1P16157 1881 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 A0A0G2JLL6 359 aaPredicted RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 IRF6O14896 467 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 AGTP01019 485 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 PRKCBP05771 671 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 MMP13P45452 471 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 HSDL1Q3SXM5 330 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 PRRT2Q7Z6L0 340 aaPredicted RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 TRIM50Q86XT4 487 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 ZBTB8OSQ8IWT0 167 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 RNF149Q8NC42 400 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 EXD1Q8NHP7 514 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 CENPTQ96BT3 561 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 CCDC114Q96M63 670 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 OSBPL8Q9BZF1 889 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 CDC42EP4Q9H3Q1 356 aaKnown RBP16.49■□□□□ 0.23
BRF1-212ENST00000547562 SBF1O95248 1867 aa16.49■□□□□ 0.23
BRF1-212ENST00000547562 ABLIM1O14639 778 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 MEFVO15553 781 aaPredicted RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 LGR5O75473 907 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 CNMDO75829 334 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 GJB6O95452 261 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 MYL6P60660 151 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 MCL1Q07820 350 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 MAPK6Q16659 721 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 LRRC71Q8N4P6 559 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 ASCC2Q9H1I8 757 aaPredicted RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 IP6K2Q9UHH9 426 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 USTQ9Y2C2 406 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 IGKV6-21A0A0C4DH24 114 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 SOCS7O14512 581 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 RASGRF2O14827 1237 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 LSM8O95777 96 aaKnown RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 IFI35P80217 286 aaPredicted RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 CCNG2Q16589 344 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 KCNV1Q6PIU1 500 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 YTHDF3Q7Z739 585 aaKnown RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 FAM212AQ96EL1 285 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 NIF3L1Q9GZT8 377 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 STMN4Q9H169 189 aaPredicted RBP16.48■□□□□ 0.23
BRF1-212ENST00000547562 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 NEU2Q9Y3R4 380 aa16.48■□□□□ 0.23
BRF1-212ENST00000547562 EVPLQ92817 2033 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ADM5C9JUS6 153 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 CALB1P05937 261 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 PGK2P07205 417 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ATF2P15336 505 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 CD58P19256 250 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 ITGA8P53708 1063 aa16.47■□□□□ 0.23
BRF1-212ENST00000547562 RPL7AP62424 266 aaKnown RBP16.47■□□□□ 0.23
BRF1-212ENST00000547562 CAV1Q03135 178 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms