RNA–Protein interactions for RNA: ENST00000546876.1

RBM19-204, Transcript of RNA binding motif protein 19, human

TSL 3

Gene RBM19, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM19-204	ENST00000546876	PLVAP	Q9BX97	442 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	NIF3L1	Q9GZT8	377 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	CWH43	Q9H720	699 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	VRTN	Q9H8Y1	702 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	SLC28A3	Q9HAS3	691 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	6e-6	■■■■■ 48.1
RBM19-204	ENST00000546876	CACNG4	Q9UBN1	327 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	ADAM28	Q9UKQ2	775 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	DAAM1	Q9Y4D1	1078 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876	SNX9	Q9Y5X1	595 aa		11.17	□□□□□ -0.62
RBM19-204	ENST00000546876		A0A1W2PQC6	194 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	LCHN	A4D1U4	455 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	GOLGA6L6	A8MZA4	724 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	NT5C1B-RDH14	C9J2C7	533 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	CYB561D2	O14569	222 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	VNN1	O95497	513 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	RB1	P06400	928 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	PON1	P27169	355 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	BMPR1A	P36894	532 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	PBX3	P40426	434 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	MFAP3	P55082	362 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	TRIM65	Q6PJ69	517 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	DRC7	Q8IY82	874 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	SLC39A11	Q8N1S5	342 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	SEMA4D	Q92854	862 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	IGSF21	Q96ID5	467 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	PAAF1	Q9BRP4	392 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	NUP58	Q9BVL2	599 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	PBX4	Q9BYU1	374 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	XYLT2	Q9H1B5	865 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	CYP3A43	Q9HB55	503 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	GDAP2	Q9NXN4	497 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	HCST	Q9UBK5	93 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	APEX2	Q9UBZ4	518 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	MICAL3	Q7RTP6	2002 aa		11.16	□□□□□ -0.62
RBM19-204	ENST00000546876	FSD2	A1L4K1	749 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	LINC01553	A4QN01	128 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	PPEF2	O14830	753 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SYN3	O14994	580 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	TEX33	O43247	280 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	B4GALT3	O60512	393 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	LPXN	O60711	386 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	FGF18	O76093	207 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	MYOG	P15173	224 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SLC9A1	P19634	815 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	DNAJB2	P25686	324 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	ZNF75D	P51815	510 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	TRIM14	Q14142	442 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	FAM171A1	Q5VUB5	890 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SPECC1L	Q69YQ0	1117 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	FUT10	Q6P4F1	479 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	PDXDC1	Q6P996	788 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SCARA5	Q6ZMJ2	495 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	DPH6	Q7L8W6	267 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	CACNA2D4	Q7Z3S7	1137 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	PPFIBP1	Q86W92	1011 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	CEP57	Q86XR8	500 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	FMNL3	Q8IVF7	1028 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	TMEM86A	Q8N2M4	240 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	TOP6BL	Q8N6T0	577 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	ZNF397	Q8NF99	534 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	TIFA	Q96CG3	184 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SUSD3	Q96L08	255 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SENP8	Q96LD8	212 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	NKX2-4	Q9H2Z4	354 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	PRO3102	Q9H379	93 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SNX25	Q9H3E2	840 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	PLCB1	Q9NQ66	1216 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	MTUS1	Q9ULD2	1270 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	PCDHB8	Q9UN66	801 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	SSX2IP	Q9Y2D8	614 aa		11.15	□□□□□ -0.62
RBM19-204	ENST00000546876	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	9e-7	■■■□□ 17.1
RBM19-204	ENST00000546876		I3L4J1	428 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	UROD	P06132	367 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	FAM163B	P0C2L3	166 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	PBX2	P40425	430 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	AARS	P49588	968 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	ERVK-21	P61565	698 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	PLCB3	Q01970	1234 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	GCNT1	Q02742	428 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	TAP1	Q03518	808 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	YWHAH	Q04917	246 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	UBE3A	Q05086	875 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	CUL2	Q13617	745 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	RAPGEF1	Q13905	1077 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	USP41	Q3LFD5	358 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	TIGD5	Q53EQ6	642 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	SPOPL	Q6IQ16	392 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	RRAGA	Q7L523	313 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	DDX53	Q86TM3	631 aa	Known RBP	11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	ADGRF2	Q8IZF7	708 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	THEM5	Q8N1Q8	247 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	KLHL23	Q8NBE8	558 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	C3orf58	Q8NDZ4	430 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	FBXO22	Q8NEZ5	403 aa		11.14	□□□□□ -0.63
RBM19-204	ENST00000546876	LMO3	Q8TAP4	145 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms