RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 UBE2ZQ9H832 354 aaPredicted RBP18.14■□□□□ 0.49
LTBR-215ENST00000546296 FNIP2Q9P278 1114 aa18.14■□□□□ 0.49
LTBR-215ENST00000546296 LRRIQ3A6PVS8 624 aaPredicted RBP18.13■□□□□ 0.49
LTBR-215ENST00000546296 KPNA7A9QM74 516 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 M0QZQ0 153 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 CYB561D2O14569 222 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 SPTLC1O15269 473 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 ODC1P11926 461 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 KCNA5P22460 613 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 AARSP49588 968 aaKnown RBP eCLIP18.13■□□□□ 0.49
LTBR-215ENST00000546296 MYO1EQ12965 1108 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 BIRC3Q13489 604 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 CTC1Q2NKJ3 1217 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 CCDC183Q5T5S1 534 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 PALB2Q86YC2 1186 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 LRRC52Q8N7C0 313 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 PLEKHO2Q8TD55 490 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 ZNF516Q92618 1163 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 MKNK1Q9BUB5 465 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 THEGQ9P2T0 379 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 SIX4Q9UIU6 781 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 TIMM13Q9Y5L4 95 aaPredicted RBP18.13■□□□□ 0.49
LTBR-215ENST00000546296 MYO7AQ13402 2215 aa18.13■□□□□ 0.49
LTBR-215ENST00000546296 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
LTBR-215ENST00000546296 SLC16A3O15427 465 aaKnown RBP18.12■□□□□ 0.49
LTBR-215ENST00000546296 CLSTN1O94985 981 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 PTMSP20962 102 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 NLRP12P59046 1061 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 DLG4P78352 724 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 RBM10P98175 930 aaKnown RBP18.12■□□□□ 0.49
LTBR-215ENST00000546296 COL19A1Q14993 1142 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 CTXN3Q4LDR2 81 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 TTI2Q6NXR4 508 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 METTL23Q86XA0 190 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 CASP10Q92851 521 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 HPDLQ96IR7 371 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 CLSTN3Q9BQT9 956 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
LTBR-215ENST00000546296 MTRRQ9UBK8 725 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 DACH1Q9UI36 760 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 BARX2Q9UMQ3 279 aaPredicted RBP18.12■□□□□ 0.49
LTBR-215ENST00000546296 BACE2Q9Y5Z0 518 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 HCFC2Q9Y5Z7 792 aa18.12■□□□□ 0.49
LTBR-215ENST00000546296 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 H3BQ06 376 aaPredicted RBP18.11■□□□□ 0.49
LTBR-215ENST00000546296 IKBKBO14920 756 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 FGFR1OPO95684 399 aaKnown RBP18.11■□□□□ 0.49
LTBR-215ENST00000546296 GLUD1P00367 558 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 TRIM49P0CI25 452 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 TRIM49CP0CI26 452 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 EPCAMP16422 314 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 OR1D2P34982 312 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 ARPP19P56211 112 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 CLDN10P78369 228 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 YWHAHQ04917 246 aaPredicted RBP18.11■□□□□ 0.49
LTBR-215ENST00000546296 AAK1Q2M2I8 961 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 SCARA3Q6AZY7 606 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 ZC3H3Q8IXZ2 948 aaKnown RBP18.11■□□□□ 0.49
LTBR-215ENST00000546296 VN1R2Q8NFZ6 395 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 CXorf38Q8TB03 319 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 SLC22A17Q8WUG5 538 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 DUSP9Q99956 384 aaKnown RBP18.11■□□□□ 0.49
LTBR-215ENST00000546296 RWDD2AQ9UIY3 292 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 DSEQ9UL01 958 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 CDY1Q9Y6F8 540 aa18.11■□□□□ 0.49
LTBR-215ENST00000546296 PDCD11Q14690 1871 aaKnown RBP18.1■□□□□ 0.49
LTBR-215ENST00000546296 STX10O60499 249 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 HUS1O60921 280 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 GLP2RO95838 553 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 CST3P01034 146 aaPredicted RBP18.1■□□□□ 0.49
LTBR-215ENST00000546296 SPATA31D3P0C874 917 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 TYMPP19971 482 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 LTBRP36941 435 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 CLCN4P51793 760 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 TFF2Q03403 129 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 ENPEPQ07075 957 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 DLX2Q07687 328 aaPredicted RBP18.1■□□□□ 0.49
LTBR-215ENST00000546296 MRPL58Q14197 206 aaKnown RBP18.1■□□□□ 0.49
LTBR-215ENST00000546296 CLUL1Q15846 466 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 CCDC40Q4G0X9 1142 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 OVOS1Q6IE37 1185 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 ZNF280DQ6N043 979 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 ELMSAN1Q6PJG2 1045 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 FOXR2Q6PJQ5 311 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 TMEM184AQ6ZMB5 413 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 SPATA31D4Q6ZUB0 917 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
LTBR-215ENST00000546296 BORCS6Q96GS4 357 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 MMRN2Q9H8L6 949 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 ARMCX3Q9UH62 379 aaPredicted RBP18.1■□□□□ 0.49
LTBR-215ENST00000546296 DPP7Q9UHL4 492 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 SNX9Q9Y5X1 595 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 REV3LO60673 3130 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 COL6A3P12111 3177 aa18.1■□□□□ 0.49
LTBR-215ENST00000546296 ADAM12O43184 909 aa18.09■□□□□ 0.49
LTBR-215ENST00000546296 TGM5O43548 720 aa18.09■□□□□ 0.49
LTBR-215ENST00000546296 TBX10O75333 385 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms