RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SMG9Q9H0W8 520 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-216ENST00000545663 SCUBE2Q9NQ36 999 aa16.99■□□□□ 0.31
CLSTN3-216ENST00000545663 RGL1Q9NZL6 768 aa16.99■□□□□ 0.31
CLSTN3-216ENST00000545663 DPYSL4O14531 572 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 SLC27A2O14975 620 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 GLRA2P23416 452 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 GNA11P29992 359 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 POU5F1BQ06416 359 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 LMAN2Q12907 356 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 DMC1Q14565 340 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 CCNI2Q6ZMN8 369 aaPredicted RBP16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 RNF19BQ6ZMZ0 732 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 LEMD2Q8NC56 503 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 RPLP0P6Q8NHW5 317 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 CAMK1GQ96NX5 476 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 GKN1Q9NS71 199 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 EVLQ9UI08 416 aaPredicted RBP16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 GDAQ9Y2T3 454 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 THADAQ6YHU6 1953 aa16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 URB1O60287 2271 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-216ENST00000545663 TRDMT1O14717 391 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 TRAPPC3O43617 180 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 IGHDP01880 384 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 ARL2P36404 184 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 ZNF423Q2M1K9 1284 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 TPGS2Q68CL5 300 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 TRIM68Q6AZZ1 485 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 ARMCX6Q7L4S7 300 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 SYT13Q7L8C5 426 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 DAGLBQ8NCG7 672 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 SLC39A7Q92504 469 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 EZH1Q92800 747 aaPredicted RBP16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 PPP1R10Q96QC0 940 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 LXNQ9BS40 222 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 DNAJC25Q9H1X3 360 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 SLKQ9H2G2 1235 aaPredicted RBP16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 HPS4Q9NQG7 708 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 PPME1Q9Y570 386 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 RAI2Q9Y5P3 530 aa16.97■□□□□ 0.31
CLSTN3-216ENST00000545663 CYP3A7-CYP3A51PA0A087WV96 503 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 VNN2O95498 520 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 CYP3A7P24462 503 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 GALK1P51570 392 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 SOX4Q06945 474 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 MRPL58Q14197 206 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 USP39Q53GS9 565 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 GAREM2Q75VX8 874 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 OR2I1PQ8NGU4 316 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 BPIFB1Q8TDL5 484 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 POLR3CQ9BUI4 534 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 NUSAP1Q9BXS6 441 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 CRISPLD1Q9H336 500 aa16.96■□□□□ 0.31
CLSTN3-216ENST00000545663 PLXNB3Q9ULL4 1909 aa16.96■□□□□ 0.3
CLSTN3-216ENST00000545663 PIEZO2Q9H5I5 2752 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 GON4LQ3T8J9 2241 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 PTGER3P43115 390 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 CTTNQ14247 550 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 CTXN3Q4LDR2 81 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 ZNF605Q86T29 641 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 C4orf19Q8IY42 314 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 FRMD1Q8N878 549 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 BICD2Q8TD16 824 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 GTPBP2Q9BX10 602 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 NFKBIZQ9BYH8 718 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 RWDD1Q9H446 243 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 EBF3Q9H4W6 596 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 AFF4Q9UHB7 1163 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 YIPF1Q9Y548 306 aa16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
CLSTN3-216ENST00000545663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 KLF18A0A0U1RQI7 1052 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 ANTXRLA6NF34 631 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 SLC37A4O43826 429 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 PLCB2Q00722 1185 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 PPP2R5CQ13362 524 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 RUNX3Q13761 415 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 EEF1DP3Q658K8 133 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 MARCH9Q86YJ5 346 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 TMEFF1Q8IYR6 380 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 DYDC2Q96IM9 177 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 UBL7Q96S82 380 aaPredicted RBP16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 FAM83CQ9BQN1 747 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 ATXN3LQ9H3M9 355 aa16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 NAP1L2Q9ULW6 460 aaPredicted RBP16.94■□□□□ 0.3
CLSTN3-216ENST00000545663 A0A087WWV3 80 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 H7C4K7 107 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 DKC1O60832 514 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 EDN1P05305 212 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 CD59P13987 128 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms