RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 TAF2Q6P1X5 1199 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 SLC30A10Q6XR72 485 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 SYT9Q86SS6 491 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 RSPH3Q86UC2 560 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 FAM160B2Q86V87 743 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 LCORLQ8N3X6 602 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 FAM169BQ8N8A8 192 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 PI4K2BQ8TCG2 481 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 STK35Q8TDR2 534 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 CHURC1Q8WUH1 139 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 SDR42E1Q8WUS8 393 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 DNASE1L2Q92874 299 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 EVI5LQ96CN4 794 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 CASD1Q96PB1 797 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 DEPDC7Q96QD5 511 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 KXD1Q9BQD3 176 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.66□□□□□ -1.18
LDHA-223ENST00000545215 TMEM117Q9H0C3 514 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 RBSNQ9H1K0 784 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 BOLA2Q9H3K6 86 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 DPP7Q9UHL4 492 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 CCPG1Q9ULG6 757 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 CDY2AQ9Y6F7 541 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 NID2Q14112 1375 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 OTOGQ6ZRI0 2925 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 SIN3BO75182 1162 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 MBD4O95243 580 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 CNPP09543 421 aaKnown RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 PXNP49023 591 aaPredicted RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 SNAP25P60880 206 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 CXADRP78310 365 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 SEPT6Q14141 434 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 BMP2KLQ5H9B9 411 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 TOGARAM2Q6ZUX3 1019 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 C16orf86Q6ZW13 317 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 SLC24A5Q71RS6 500 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 DDX53Q86TM3 631 aaKnown RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 AMOTL1Q8IY63 956 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 REXO1Q8N1G1 1221 aaKnown RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 STAG1Q8WVM7 1258 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 LMBR1Q8WVP7 490 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 GAL3ST3Q96A11 431 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 TMEM169Q96HH4 297 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 KIF2CQ99661 725 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 EMILIN2Q9BXX0 1053 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 ADAM19Q9H013 955 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 ARMT1Q9H993 441 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 PIDD1Q9HB75 910 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 DCP1AQ9NPI6 582 aaPredicted RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 RGS18Q9NS28 235 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 PAG1Q9NWQ8 432 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 CLIP2Q9UDT6 1046 aa7.65□□□□□ -1.18
LDHA-223ENST00000545215 EVLQ9UI08 416 aaPredicted RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 HEMK1Q9Y5R4 338 aaPredicted RBP7.65□□□□□ -1.18
LDHA-223ENST00000545215 KIF26AQ9ULI4 1882 aaPredicted RBP7.64□□□□□ -1.19
LDHA-223ENST00000545215 TCRBV5S4A2TA0A5A2 114 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 C9IYK1 514 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 MGEA5O60502 916 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 PLA2G6O60733 806 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ICAM1P05362 532 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 KRT10P13645 584 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 TNFRSF8P28908 595 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ADD2P35612 726 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ZNF165P49910 485 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 FAM189BP81408 668 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 TTC22Q5TAA0 569 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ELMSAN1Q6PJG2 1045 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 RNF207Q6ZRF8 634 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 REC114Q7Z4M0 266 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 SLCO6A1Q86UG4 719 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ZNF280BQ86YH2 543 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 SULF2Q8IWU5 870 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 LRRC43Q8N309 656 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 KBTBD3Q8NAB2 608 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 GMCL1P1Q8NEA9 526 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 OTUD7AQ8TE49 926 aaPredicted RBP7.64□□□□□ -1.19
LDHA-223ENST00000545215 TNFRSF25Q93038 417 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 SPATA33Q96N06 139 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 NT5C3AQ9H0P0 336 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ELAC1Q9H777 363 aaKnown RBP7.64□□□□□ -1.19
LDHA-223ENST00000545215 ATP6V0A4Q9HBG4 840 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 C1orf112Q9NSG2 853 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 ATP8A2Q9NTI2 1148 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 TMEM161AQ9NX61 479 aa7.64□□□□□ -1.19
LDHA-223ENST00000545215 APOBEC2Q9Y235 224 aaKnown RBP7.64□□□□□ -1.19
LDHA-223ENST00000545215 R3HCC1Q9Y3T6 440 aaKnown RBP7.64□□□□□ -1.19
LDHA-223ENST00000545215 NUP205Q92621 2012 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 CACNA1DQ01668 2161 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 BLACEA4D250 179 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 NT5C1B-RDH14C9J2C7 533 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 E9PAM4 449 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 PRKAB2O43741 272 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 ARNTP27540 789 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 MCM4P33991 863 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 RPS6P62753 249 aaKnown RBP7.63□□□□□ -1.19
LDHA-223ENST00000545215 MRPS6P82932 125 aaKnown RBP7.63□□□□□ -1.19
LDHA-223ENST00000545215 LRRC32Q14392 662 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 LRRC14Q15048 493 aa7.63□□□□□ -1.19
LDHA-223ENST00000545215 CELF3Q5SZQ8 465 aaKnown RBP7.63□□□□□ -1.19
LDHA-223ENST00000545215 SCARA3Q6AZY7 606 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms