RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 IRF2BP2Q7Z5L9 587 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 SLC35F6Q8N357 371 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 RNF10Q8N5U6 811 aaKnown RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 ACRBPQ8NEB7 543 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 DBF4BQ8NFT6 615 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 TRIM58Q8NG06 486 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 FNBP1Q96RU3 617 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 ADAM2Q99965 735 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 HIPK3Q9H422 1215 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 RGS18Q9NS28 235 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 KLK14Q9P0G3 267 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 ARHGAP20Q9P2F6 1191 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 NENFQ9UMX5 172 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 DERAQ9Y315 318 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 REXO2Q9Y3B8 237 aaKnown RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 SAR1BQ9Y6B6 198 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 BZW2Q9Y6E2 419 aaKnown RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 MICAL3Q7RTP6 2002 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 ZNF263O14978 683 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 KIAA0355O15063 1070 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 FANCGO15287 622 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 TACC1O75410 805 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 ZRANB2O95218 330 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 ANXA13P27216 316 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 ASPAP45381 313 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CLCN6P51797 869 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 AP3M2P53677 418 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CCL23P55773 120 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 NOP14P78316 857 aaKnown RBP7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 TFAMQ00059 246 aaKnown RBP7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 GCNT1Q02742 428 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 GPS2Q13227 327 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 SURF1Q15526 300 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 DUOXA2Q1HG44 320 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CLLU1OSQ5K130 101 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 C10orf76Q5T2E6 689 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CCDC70Q6NSX1 233 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CD300LGQ6UXG3 332 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 RRAGAQ7L523 313 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 USP37Q86T82 979 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 ECHDC2Q86YB7 292 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 MSANTD4Q8NCY6 345 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 SHC3Q92529 594 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 FAM212AQ96EL1 285 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 APOL6Q9BWW8 343 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 DEF6Q9H4E7 631 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 VRTNQ9H8Y1 702 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 AIPL1Q9NZN9 384 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CACNG4Q9UBN1 327 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 DNAJC12Q9UKB3 198 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 RAB21Q9UL25 225 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 GUCA1BQ9UMX6 200 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CNTN6Q9UQ52 1028 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 ATP11BQ9Y2G3 1177 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 JRKLQ9Y4A0 524 aa7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 V9GYY5 206 aaPredicted RBP7.52□□□□□ -1.21
HMGCS2-204ENST00000544913 CHD9Q3L8U1 2897 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 A0A0U1RQJ8 604 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 ARL5CA6NH57 179 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 DCDC2CA8MYV0 355 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 SPTLC1O15269 473 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 ZC3H11AO75152 810 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 STAU1O95793 577 aaKnown RBP7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 CLTBP09497 229 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 MLH1P40692 756 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 CBX1P83916 185 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 ITIH3Q06033 890 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 DRAP1Q14919 205 aaPredicted RBP7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 TEX35Q5T0J7 233 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 LIMS2Q7Z4I7 341 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 NECAB2Q7Z6G3 386 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 NT5DC4Q86YG4 428 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 CD302Q8IX05 232 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 FAM71AQ8IYT1 594 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 IPO4Q8TEX9 1081 aaKnown RBP7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 ATRIPQ8WXE1 791 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 RUBCNQ92622 972 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 SECISBP2LQ93073 1101 aaKnown RBP7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 KIF12Q96FN5 646 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 ALS2CR12Q96Q35 445 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 GAD1Q99259 594 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 STK33Q9BYT3 514 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 PPP1R12CQ9BZL4 782 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 SDCBP2Q9H190 292 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 GOLGA2P5Q9HBQ8 144 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 ACP6Q9NPH0 428 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 RNF14Q9UBS8 474 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 NME7Q9Y5B8 376 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 CEP290O15078 2479 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 CHD7Q9P2D1 2997 aa7.51□□□□□ -1.21
HMGCS2-204ENST00000544913 FOXN3O00409 490 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PIRO00625 290 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ENPP3O14638 875 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 TLR3O15455 904 aaKnown RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PJA2O43164 708 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 AKR1B10O60218 316 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms