RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 GPR141Q7Z602 305 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 EXD1Q8NHP7 514 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 KRT35Q92764 455 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 GLMNQ92990 594 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 WNK4Q96J92 1243 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
PCDH9-204ENST00000544246 THTPAQ9BU02 230 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 ALOX15P16050 662 aaPredicted RBP10.88□□□□□ -0.67
PCDH9-204ENST00000544246 IFNAR1P17181 557 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 RGS2P41220 211 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 GPD1LQ8N335 351 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 IL1RL2Q9HB29 575 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
PCDH9-204ENST00000544246 MBD2Q9UBB5 411 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 AP4S1Q9Y587 144 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 RSPH10B2B2RC85 870 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 PDE5AO76074 875 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 PGK2P07205 417 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 RSPH10BP0C881 870 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 HEATR4Q86WZ0 1026 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 V9GYQ6 96 aa10.88□□□□□ -0.67
PCDH9-204ENST00000544246 CHN1P15882 459 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 PTRHD1Q6GMV3 140 aaKnown RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ATL2Q8NHH9 583 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 FAM45AQ8TCE6 357 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ZNF473Q8WTR7 871 aaKnown RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 DYNLL2Q96FJ2 89 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 CAPN10Q9HC96 672 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 PCMTD2Q9NV79 361 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ALDH1A2O94788 518 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 SNX17Q15036 470 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 NCF4Q15080 339 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ERAP2Q6P179 960 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 GAS2L3Q86XJ1 694 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 DGKHQ86XP1 1220 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 KLHL25Q9H0H3 589 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 MRPL39Q9NYK5 338 aaKnown RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 MORC2Q9Y6X9 1032 aaPredicted RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ABCB11O95342 1321 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 MDH1P40925 334 aaKnown RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 KRT76Q01546 638 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 KNOP1Q1ED39 458 aaKnown RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 P3H1Q32P28 736 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 TRIM65Q6PJ69 517 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 LRIG3Q6UXM1 1119 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 TNIP3Q96KP6 325 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 RAD21L1Q9H4I0 556 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 CYP39A1Q9NYL5 469 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 UBAP1Q9NZ09 502 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 TRIM49BA6NDI0 452 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 PEX1O43933 1283 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 SFNP31947 248 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 CHI3L1P36222 383 aaPredicted RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 NUP107P57740 925 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 VN1R5Q7Z5H4 357 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 MUC3BQ9H195 1237 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 XPO7Q9UIA9 1087 aaKnown RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 SPATA2Q9UM82 520 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ANKARQ7Z5J8 1434 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 FAM25AB3EWG3 89 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 FAM25CB3EWG5 89 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 FAM25GB3EWG6 89 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 CAND2O75155 1236 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 PRIM2P49643 509 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 SGO1Q5FBB7 561 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 TTC39BQ5VTQ0 682 aaPredicted RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 ZNF746Q6NUN9 644 aaPredicted RBP10.87□□□□□ -0.67
PCDH9-204ENST00000544246 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 VMP1Q96GC9 406 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 APOL5Q9BWW9 433 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 CEP152O94986 1710 aa10.87□□□□□ -0.67
PCDH9-204ENST00000544246 USP17L3A6NCW0 530 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 USP17L4A6NCW7 530 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CYP21A2P08686 494 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 USP17L8P0C7I0 530 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 ATP1A3P13637 1013 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 PSMA4P25789 261 aaKnown RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TALDO1P37837 337 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 STAT3P40763 770 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 RESTQ13127 1097 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TTLL4Q14679 1199 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 USP17L1Q7RTZ2 530 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 OR8H2Q8N162 312 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 C1orf131Q8NDD1 294 aaKnown RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 SERHL2Q9H4I8 314 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 SERHLQ9NQF3 203 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 SPASTQ9UBP0 616 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 STON1Q9Y6Q2 735 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 PRKAB2O43741 272 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CDK8P49336 464 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 ATP12AP54707 1039 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 TSC22D1Q15714 1073 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 DALRD3Q5D0E6 543 aaKnown RBP10.86□□□□□ -0.67
PCDH9-204ENST00000544246 NEK10Q6ZWH5 1172 aa10.86□□□□□ -0.67
PCDH9-204ENST00000544246 CYP4Z1Q86W10 505 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms