RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CHMP1BQ7LBR1 199 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 MIER2Q8N344 545 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 WRNIP1Q96S55 665 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 TRIM8Q9BZR9 551 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 BATF3Q9NR55 127 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 MTO1Q9Y2Z2 717 aaKnown RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 C21orf2O43822 256 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 AVPR1AP37288 418 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 KCNK10P57789 538 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 OVGP1Q12889 678 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 TTC39BQ5VTQ0 682 aaPredicted RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 BNIPLQ7Z465 357 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 COA1Q9GZY4 146 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 CARD9Q9H257 536 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 FAM107AO95990 144 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 ITIH2P19823 946 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 CSE1LP55060 971 aaKnown RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 HLFQ16534 295 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 C18orf8Q96DM3 657 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 UTYO14607 1347 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 SFNP31947 248 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 GTF2H3Q13889 308 aa16.17■□□□□ 0.18
CHD4-210ENST00000544040 SPATA2LQ8IUW3 424 aaPredicted RBP16.17■□□□□ 0.18
CHD4-210ENST00000544040 YWHABP31946 246 aaKnown RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 QRICH1Q2TAL8 776 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 SLC44A4Q53GD3 710 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 MB21D2Q8IYB1 491 aaPredicted RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 NSL1Q96IY1 281 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 SRPK1Q96SB4 655 aaKnown RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 TOMM70O94826 608 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 PDGFRAP16234 1089 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 DDX5P17844 614 aaKnown RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 KYNUQ16719 465 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 MROH9Q5TGP6 573 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 SH3TC2Q8TF17 1288 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 MMP19Q99542 508 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 HOXC10Q9NYD6 342 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 CDH16O75309 829 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 USP1O94782 785 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 NUDT2P50583 147 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 ITGA8P53708 1063 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 WLSQ5T9L3 541 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 E4F1Q66K89 784 aaPredicted RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 TSPAN17Q96FV3 270 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 EEF2KO00418 725 aaKnown RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 PDGFRBP09619 1106 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 ETFBP38117 255 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 RAB14P61106 215 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 GPSM2P81274 684 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 DSG1Q02413 1049 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 TTLL4Q14679 1199 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 TUBGCP3Q96CW5 907 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 ABCC2Q92887 1545 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.16■□□□□ 0.18
CHD4-210ENST00000544040 MEI1Q5TIA1 1274 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 NDEL1Q9GZM8 345 aa16.16■□□□□ 0.18
CHD4-210ENST00000544040 CCT8L1PA6NM43 557 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 MAGEA4P43358 317 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 ACSF2Q96CM8 615 aaPredicted RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 AGAP1Q9UPQ3 857 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 RSPH10B2B2RC85 870 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 ALBP02768 609 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 RSPH10BP0C881 870 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 ALDH6A1Q02252 535 aaKnown RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 SLC18A3Q16572 532 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 BBS7Q8IWZ6 715 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 APEX2Q9UBZ4 518 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 SOX13Q9UN79 622 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 TFR2Q9UP52 801 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 IPMKQ8NFU5 416 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 HNRNPH1P31943 449 aaKnown RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 CCZ1BP86790 482 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 CCZ1P86791 482 aaPredicted RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 KHDRBS2Q5VWX1 349 aaKnown RBP16.15■□□□□ 0.18
CHD4-210ENST00000544040 HS6ST3Q8IZP7 471 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 FOPNLQ96NB1 174 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 MUC3BQ9H195 1237 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 EPB42P16452 691 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 AGBL2Q5U5Z8 902 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 PPP1R18Q6NYC8 613 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 JAMLQ86YT9 394 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 RUBCNQ92622 972 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 GLMNQ92990 594 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 SGF29Q96ES7 293 aa16.15■□□□□ 0.18
CHD4-210ENST00000544040 ZCCHC18P0CG32 403 aa16.14■□□□□ 0.17
CHD4-210ENST00000544040 RALBP11234 206 aa16.14■□□□□ 0.17
CHD4-210ENST00000544040 SERPINB5P36952 375 aa16.14■□□□□ 0.17
CHD4-210ENST00000544040 KCNJ1P48048 391 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms