RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	SLC39A4	Q6P5W5	647 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	MON1B	Q7L1V2	547 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	ZNF677	Q86XU0	584 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	PASD1	Q8IV76	773 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	C4orf19	Q8IY42	314 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	GLIS1	Q8NBF1	620 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	NAF1	Q96HR8	494 aa	Known RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	FAM167B	Q9BTA0	163 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	VPS37B	Q9H9H4	285 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	RNPEPL1	Q9HAU8	725 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	KLHL11	Q9NVR0	708 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	TCEAL9	Q9UHQ7	104 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	GRID1	Q9ULK0	1009 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	ZNF536	O15090	1300 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	EDF1	O60869	148 aa	Known RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	CYP1A1	P04798	512 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	ZSCAN5DP	P0CG00	497 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	CA4	P22748	312 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	SSTR3	P32745	418 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	RPA3	P35244	121 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	LMNB2	Q03252	620 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	PDK4	Q16654	411 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	AOC3	Q16853	763 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	NIPA1	Q7RTP0	329 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	FAM13C	Q8NE31	585 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	EXD1	Q8NHP7	514 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	INPP5D	Q92835	1189 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	TTC25	Q96NG3	672 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	SMG5	Q9UPR3	1016 aa	Known RBP	13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	ZNF148	Q9UQR1	794 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	UBIAD1	Q9Y5Z9	338 aa		13.69	□□□□□ -0.22
DDX11-223	ENST00000542838	PI4K2B	G5E9Z4	385 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	NFIB	O00712	420 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	LUC7L3	O95232	432 aa	Known RBP	13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	GCK	P35557	465 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	CETN2	P41208	172 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	FASTKD3	Q14CZ7	662 aa	Known RBP	13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	LONP2	Q86WA8	852 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	TDRP	Q86YL5	185 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	GPD1L	Q8N335	351 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	MASTL	Q96GX5	879 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	FBXL18	Q96ME1	805 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	DNPEP	Q9ULA0	475 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	PEX11A	O75192	247 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	CFH	P08603	1231 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	KRT10	P13645	584 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	GNAZ	P19086	355 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	CALB2	P22676	271 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	RAD23B	P54727	409 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	BPIFB4	P59827	614 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	PSMC5	P62195	406 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	MRPS9	P82933	396 aa	Known RBP	13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	BLMH	Q13867	455 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	SLC1A5	Q15758	541 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	HHAT	Q5VTY9	493 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	RGS9BP	Q6ZS82	235 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	FAM213A	Q9BRX8	229 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	ADAM33	Q9BZ11	813 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	TBC1D22B	Q9NU19	505 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	CYP39A1	Q9NYL5	469 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	FEM1B	Q9UK73	627 aa		13.68	□□□□□ -0.22
DDX11-223	ENST00000542838	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	ETS1	P14921	441 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	PECAM1	P16284	738 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	DSG3	P32926	999 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	ARSE	P51690	589 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	SOX10	P56693	466 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	ATP13A4	Q4VNC1	1196 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	WDR44	Q5JSH3	913 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	TRIM68	Q6AZZ1	485 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	OGFOD1	Q8N543	542 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	STK32A	Q8WU08	396 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	C10orf82	Q8WW14	230 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	BSND	Q8WZ55	320 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	TBC1D10A	Q9BXI6	508 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	MRPL47	Q9HD33	250 aa	Known RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	EIF4E1B	A6NMX2	242 aa	Known RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	LIN7A	O14910	233 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	TLR3	O15455	904 aa	Known RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	LIAS	O43766	372 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	PLA2G6	O60733	806 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	CBX6	O95503	412 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	T-ENOL	P0DO92	83 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	ATF7	P17544	494 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	EPHB2	P29323	1055 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	ABL2	P42684	1182 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	RASSF2	P50749	326 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	CCNH	P51946	323 aa	Predicted RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	NFX1	Q12986	1120 aa	Known RBP	13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	GPS1	Q13098	491 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	MAMLD1	Q13495	774 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	LARGE2	Q8N3Y3	721 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	ANKRD27	Q96NW4	1050 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	SENP1	Q9P0U3	644 aa		13.67	□□□□□ -0.22
DDX11-223	ENST00000542838	HNRNPDL	O14979	420 aa	Known RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms